KEGG   Desulfolithobacter dissulfuricans: GF1_31740
Entry
GF1_31740         CDS       T08652                                 
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
  KO
K03092  RNA polymerase sigma-54 factor
Organism
ddu  Desulfolithobacter dissulfuricans
Pathway
ddu02020  Two-component system
ddu02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:ddu00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    GF1_31740 (rpoN)
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    GF1_31740 (rpoN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ddu03021]
    GF1_31740 (rpoN)
Transcription machinery [BR:ddu03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     GF1_31740 (rpoN)
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID HTH_IclR Arg_repressor HTH_21
Other DBs
NCBI-ProteinID: BCO10798
UniProt: A0A915XLH6
LinkDB
Position
complement(3525067..3526530)
AA seq 487 aa
MVLELRQQLKLAQKLVMTPQLRQAIKLLQLNRMELTDALQAEIEQNPLLEEALDVEEKVQ
NPEALSAEEVKEVPESVVTEQVAGDNPATVAEINWEDYANNFDTADFSFARETPPADAPS
QFDFISAKPGLEAHLQWQLTHLDLTEKDMEIAQFIIGSLNHHGFLEADIEDICRYAHCDE
ETAQGVLNLIQHLDPPGVAARDIRESLLLQLEYEDYEEDDLPCVIVRDHLNLLQTRNYSV
LARKVGQPVRKVEAAVKVITRLTPYPGNEFANDQTNYVVPDVYVYKIDDEFVIQLNDEGL
PHLQLSAEYQKLLAEKKALNAESRGYLREKKRNAEWFIKSIQQRQRTIYKVMESLLRFQR
DFFEKGPGHLKPLILRDVAEDIGMHESTVSRVTSNKYAHTPQGIYELKYFFSTAVSTTNG
DTVAAESIKNRIRQLIQNEDPAKPLSDNKISQLLAEEGIKVARRTVAKYRDQLKILPVKH
RRKARTG
NT seq 1464 nt   +upstreamnt  +downstreamnt
atggtactcgagctcagacagcaactcaaactcgcccagaaactggtcatgacgccccag
ttgcgccaggccatcaagctgctgcagctcaaccgcatggaactgaccgatgctctgcag
gcggaaattgaacagaacccgctgctggaagaggccctggacgttgaggagaaggtacag
aaccccgaggccctttcggccgaggaggtcaaggaggtgcccgagtccgtggtcaccgaa
caggtggccggtgacaatccggccacggtggcggagatcaactgggaagactatgccaac
aacttcgataccgctgatttttcctttgcccgcgaaaccccgccggccgatgccccgtcc
cagttcgacttcatctccgccaagccaggcctggaggcccatctgcagtggcagctcacc
cacctggatctgacggaaaaggacatggagatcgcccagttcatcatcggcagtctcaac
caccacggcttcctggaagccgacatcgaggacatctgccgctacgcccactgcgacgag
gaaaccgcccagggcgttctcaacctgatccagcacctggacccgccgggtgtcgcggcc
cgcgacatcagggaatcgcttcttctgcagctggaatacgaggattacgaggaggacgac
ctgccctgcgtcattgtccgggaccacctcaacctgctccagaccaggaattattccgtc
ctggccagaaaggtgggccagccggtgcgcaaggtcgaggccgccgtcaaggtcatcacc
cgcctgaccccctacccgggcaatgaattcgctaatgaccagaccaactacgtggtcccg
gacgtctatgtctacaagatcgacgacgaatttgtcatccagctcaacgacgagggactg
ccccacctgcagctctcggccgaataccagaaactgctggccgagaaaaaagcgctcaat
gccgagtctcgcggctacctgcgcgaaaagaaacgaaatgccgaatggttcatcaagtcc
atccagcagcgccagcggaccatctacaaggtcatggagagcctgctgcgtttccagcgg
gactttttcgaaaaaggaccgggccatctcaagccgcttatccttcgggatgtggccgag
gatatcggcatgcacgaatccacggtcagccgggtgacgtccaacaagtacgcccatacc
ccccagggcatctatgaactgaagtatttcttttccacggccgtgtccaccaccaacggc
gacaccgtggccgccgagtcgatcaagaaccggatccggcagctcatccagaacgaggat
ccggccaaaccgctcagcgacaacaagatttcccagctcctggccgaggagggaatcaaa
gttgcccgccgaaccgtggccaaataccgtgatcagctcaaaatcctgccggtcaagcac
cggcgcaaggcgcgtaccggctga

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