Desulfolithobacter dissulfuricans: GF1_31740
Help
Entry
GF1_31740 CDS
T08652
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
ddu
Desulfolithobacter dissulfuricans
Pathway
ddu02020
Two-component system
ddu02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ddu00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
GF1_31740 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
GF1_31740 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ddu03021
]
GF1_31740 (rpoN)
Transcription machinery [BR:
ddu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GF1_31740 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_IclR
Arg_repressor
HTH_21
Motif
Other DBs
NCBI-ProteinID:
BCO10798
UniProt:
A0A915XLH6
LinkDB
All DBs
Position
complement(3525067..3526530)
Genome browser
AA seq
487 aa
AA seq
DB search
MVLELRQQLKLAQKLVMTPQLRQAIKLLQLNRMELTDALQAEIEQNPLLEEALDVEEKVQ
NPEALSAEEVKEVPESVVTEQVAGDNPATVAEINWEDYANNFDTADFSFARETPPADAPS
QFDFISAKPGLEAHLQWQLTHLDLTEKDMEIAQFIIGSLNHHGFLEADIEDICRYAHCDE
ETAQGVLNLIQHLDPPGVAARDIRESLLLQLEYEDYEEDDLPCVIVRDHLNLLQTRNYSV
LARKVGQPVRKVEAAVKVITRLTPYPGNEFANDQTNYVVPDVYVYKIDDEFVIQLNDEGL
PHLQLSAEYQKLLAEKKALNAESRGYLREKKRNAEWFIKSIQQRQRTIYKVMESLLRFQR
DFFEKGPGHLKPLILRDVAEDIGMHESTVSRVTSNKYAHTPQGIYELKYFFSTAVSTTNG
DTVAAESIKNRIRQLIQNEDPAKPLSDNKISQLLAEEGIKVARRTVAKYRDQLKILPVKH
RRKARTG
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atggtactcgagctcagacagcaactcaaactcgcccagaaactggtcatgacgccccag
ttgcgccaggccatcaagctgctgcagctcaaccgcatggaactgaccgatgctctgcag
gcggaaattgaacagaacccgctgctggaagaggccctggacgttgaggagaaggtacag
aaccccgaggccctttcggccgaggaggtcaaggaggtgcccgagtccgtggtcaccgaa
caggtggccggtgacaatccggccacggtggcggagatcaactgggaagactatgccaac
aacttcgataccgctgatttttcctttgcccgcgaaaccccgccggccgatgccccgtcc
cagttcgacttcatctccgccaagccaggcctggaggcccatctgcagtggcagctcacc
cacctggatctgacggaaaaggacatggagatcgcccagttcatcatcggcagtctcaac
caccacggcttcctggaagccgacatcgaggacatctgccgctacgcccactgcgacgag
gaaaccgcccagggcgttctcaacctgatccagcacctggacccgccgggtgtcgcggcc
cgcgacatcagggaatcgcttcttctgcagctggaatacgaggattacgaggaggacgac
ctgccctgcgtcattgtccgggaccacctcaacctgctccagaccaggaattattccgtc
ctggccagaaaggtgggccagccggtgcgcaaggtcgaggccgccgtcaaggtcatcacc
cgcctgaccccctacccgggcaatgaattcgctaatgaccagaccaactacgtggtcccg
gacgtctatgtctacaagatcgacgacgaatttgtcatccagctcaacgacgagggactg
ccccacctgcagctctcggccgaataccagaaactgctggccgagaaaaaagcgctcaat
gccgagtctcgcggctacctgcgcgaaaagaaacgaaatgccgaatggttcatcaagtcc
atccagcagcgccagcggaccatctacaaggtcatggagagcctgctgcgtttccagcgg
gactttttcgaaaaaggaccgggccatctcaagccgcttatccttcgggatgtggccgag
gatatcggcatgcacgaatccacggtcagccgggtgacgtccaacaagtacgcccatacc
ccccagggcatctatgaactgaagtatttcttttccacggccgtgtccaccaccaacggc
gacaccgtggccgccgagtcgatcaagaaccggatccggcagctcatccagaacgaggat
ccggccaaaccgctcagcgacaacaagatttcccagctcctggccgaggagggaatcaaa
gttgcccgccgaaccgtggccaaataccgtgatcagctcaaaatcctgccggtcaagcac
cggcgcaaggcgcgtaccggctga
DBGET
integrated database retrieval system