Desulfolithobacter dissulfuricans: GF1_32340
Help
Entry
GF1_32340 CDS
T08652
Name
(GenBank) hypothetical protein
KO
K03723
transcription-repair coupling factor (superfamily II helicase) [EC:
5.6.2.4
]
Organism
ddu
Desulfolithobacter dissulfuricans
Pathway
ddu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ddu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GF1_32340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ddu03400
]
GF1_32340
Enzymes [BR:
ddu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GF1_32340
DNA repair and recombination proteins [BR:
ddu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
TRCF (transcription-repair coupling factor)
GF1_32340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CarD_TRCF_RID
ResIII
Cas3-like_C_2
Glyco_tran_WecG
AAA_30
SNF2-rel_dom
SWI2_SNF2
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
BCO10858
UniProt:
A0A915XLI9
LinkDB
All DBs
Position
complement(3585510..3587363)
Genome browser
AA seq
617 aa
AA seq
DB search
MADKLVTWLEREDRVYLACRSPRQAKHLGEMLQSYHIRTGRSDIPLDLARGTTGQVTLVE
HPLSSGFDLVEEKLHILSATELFGEKRLRPGKPGRTRGKEAQPVQVEELDVGDIVVHRDH
GLGTFQGLVNMEFAGQRGDFMEIRYRDGDTLYVPVDRLHWVSRYQGLPDQQPRLDRLGSE
RWQTTKKKVTDAVWKVAQELLEIYARRAIRKGHRFSPPGELYRELEESFPYDETPGQKKA
IEEVLDDLTSDQPMDRLVCGDVGYGKTEVAVRAAFKVMEDGYQVAVLVPTTVLAEQHAAT
FRDRFAGFPVEIACLNRFRSSAEQRKIVAGLADGTIDLVVGTHRLLSKDIVFNRLGLLIV
DEEHRFGVSHKEKIKKMRAEVDILTLTATPIPRTLQMSLLGIRDLSVISTPPQRRRAVKT
FLARHDQLVIREAVLRELQRGGQLFFVHNRVRTIERVAENINELVPQARVAVAHGQMPGS
QLEEIMVRFINHEIDILVCTTIIESGLDIPNAGTIIINRADHLGLADIYQLRGRVGRSSR
QSYAYLLVPSLDALTPDAKKRLRALMDCSELGGGFKLAMNDLQIRGAATCSGSPSPATSP
LWATTSTWSFCSPRWRN
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
ttggccgacaagctggtgacctggctggaacgggaagaccgggtctacctggcctgccgc
tccccccggcaggcaaaacatctgggcgaaatgctccagagctaccatatccgcaccggc
cggagcgatattcccctggacctggccagggggaccaccggacaggtgaccctggtggaa
catcccctgtcgtccggctttgacctggtggaggaaaaactccacatcctctcggccacc
gaactgttcggcgaaaagcgactcaggcccggcaaaccaggccgaaccagagggaaggag
gcccagccggtccaggtggaagaactggacgtgggcgatatcgtcgtccaccgggaccat
ggcctgggcaccttccagggcctggtcaacatggagtttgccggtcagcggggcgacttc
atggagatccgctaccgggacggcgacaccctctacgtacccgtggatcggctccactgg
gtgagccgctaccaggggttgcccgaccagcagcccaggctggaccggctgggttcggaa
cggtggcagaccaccaagaaaaaggtcaccgacgcggtatggaaggtggcccaggagctg
ctggagatctatgcccggcgggccatccgcaagggacaccggttctcgcccccgggcgag
ctgtaccgggagctggaggagtcctttccctacgatgagaccccgggccagaaaaaggcc
atcgaggaggtcctggacgatctgacctcggaccagcccatggaccggctggtctgcggc
gacgtgggctatggcaagaccgaagtcgcagtccgggccgccttcaaggtcatggaggac
ggctatcaggtcgcggtcctggtgccaaccacggtgctggccgaacagcacgccgccacc
ttccgggaccggttcgccggttttccggtggaaattgcctgcctgaaccggttccgcagt
tcggctgagcagagaaaaatcgttgccggactcgccgatggtaccattgatctggtggtg
ggcacccaccggctgctctccaaggacattgtcttcaaccgcctgggcctgcttattgtc
gacgaggagcaccggttcggggtctcccacaaggaaaagatcaagaagatgcgggccgag
gtggatatcctgaccctgaccgccaccccgatcccccgcaccctgcagatgtcgctcctg
ggcatccgggacctgtcggtgatctccaccccgccgcaaaggcgacgggcggtcaagacc
ttcctcgcccggcacgaccagctggtcatccgcgaggcggtcctccgggagctgcagcgg
ggcggacagctcttctttgtccacaaccgggtgcggaccatcgaacgggtggcggaaaac
ataaacgagctggtgccccaggcccgggtggccgtagcccacgggcagatgccgggcagc
cagctcgaagagatcatggtccggttcatcaaccatgagatcgatatcctggtctgcacc
acgatcatagaatccggtctcgatatccccaatgccggaaccatcatcatcaaccgggcc
gatcacctgggcctggccgatatctaccagctccgcggccgagtgggccgctccagccgc
cagtcctatgcctatctgctggtcccctccctggacgcgctgaccccggatgccaagaag
cggctccgggccctgatggactgctcggaactgggcggcggcttcaagctggccatgaac
gacctgcagatccgcggggcggcaacctgctcggggtctcccagtccggccacatcgccg
ctgtgggctacgacctctacctggagcttctgcagtccacggtggcggaactga
DBGET
integrated database retrieval system
