Candidatus Desulfobacillus denitrificans: DSYM_03530
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Entry
DSYM_03530 CDS
T07109
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
ddz
Candidatus Desulfobacillus denitrificans
Brite
KEGG Orthology (KO) [BR:
ddz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ddz03016
]
DSYM_03530
Enzymes [BR:
ddz01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
DSYM_03530
Transfer RNA biogenesis [BR:
ddz03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
DSYM_03530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
B12-binding
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
BBO19654
UniProt:
A0A809S8K4
LinkDB
All DBs
Position
342248..343585
Genome browser
AA seq
445 aa
AA seq
DB search
MAKKLYIKTFGCQMNEYDSDRMVDVLAAEGIEQTDSPEDADVILFNTCSVREKAQEKVFH
DLGRVRLLKQSKPDLVIGVGGCVASQEGEAIVRRAPYVDVVFGPQTLHRLPQLIRARRDS
GRPQVDVSFPEIEKFDALPPPRVEGGSAFVSVMEGCSKFCTYCIVPYTRGEEISRPLGDV
LAEIAGLAAQGVREVTLLGQNVNAWRGAMDGGEADFAFLLECVHEIPGIERIRYTTSHPR
EMTARLIEAYARLPKLVSHLHLPVQSGADRVLAAMKRGYTALEYKSLVRRLRAARPDISL
STDFIVGFPGETETDFEATMQLIEEVGFDASFSFLYSPRPGTPAAELADDTPSEVKTQRL
MRLQKRIEAQASAISAAMVGSVQRILVEGASKKDATELAGRTDNNRIVNFAGPSYAGRLT
GRFVDVLITAALPHSLRGEALLRES
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
gtggccaagaagctttacatcaagaccttcggctgccagatgaacgagtacgattcggac
cgcatggtcgacgtgctcgccgccgagggcatcgagcagaccgactcccccgaggacgcc
gacgtcatcctcttcaacacctgctcggtgcgcgagaaggcgcaggagaaggtgttccac
gacctcggccgcgtgcggctgctgaagcagtcgaagccggacctcgtcatcggcgtcggc
ggctgcgtggcgagccaggagggcgaggccatcgtgcgccgcgcgccttacgtcgatgtc
gtcttcgggccgcagacgctgcaccgcctgccgcagctcatccgcgcgcgccgcgactcc
ggccggccgcaggtggatgtctccttccccgaaatcgaaaagttcgacgccctgccgccg
ccgcgcgtggagggcggctcggccttcgtctcggtgatggaaggctgcagcaagttctgc
acctactgcatcgtgccctacacccgcggtgaggaaatctcgcgcccgctcggcgacgtg
ctggccgagatcgccggcctggcggcgcagggcgtgcgggaggtcaccctgctcggccag
aacgtgaacgcctggcgcggcgccatggacggcggcgaggcggacttcgccttcctgctc
gagtgcgtgcacgagattcccggcatcgaacggatccgctacaccacctcgcatccgcgc
gagatgacggcgcgcctgatcgaggcctatgcccggttgccgaagctggtgtcgcacctg
cacctgccggtgcagtccggcgccgaccgcgtcttggcggcgatgaagcgcggctacacc
gcgctggagtacaagtcgctggtgcgcaggctgcgcgcggcgcgcccggacatttcgctg
tcgaccgatttcatcgtcggctttcccggcgagacggagacggatttcgaggcgaccatg
cagctgatcgaggaggtcggcttcgacgcctccttcagcttcctctacagcccgcgcccg
ggcacgccggcggcggaactggccgacgacacgccgtcggaagtgaagacgcagcggctg
atgcgcctgcaaaagcgcatcgaggcgcaggcgagcgccatcagcgcggcgatggtcggc
agcgttcagcgcatcctcgtcgagggcgcctcgaagaaggacgcgacggaactcgccggc
cgcaccgacaacaaccgcatcgtcaatttcgccggcccatcgtacgccgggcgcctgacc
ggccgcttcgtcgatgtcctcatcaccgccgcgctgccgcattcgctgcgcggcgaggcc
ctcctccgcgaatcgtga
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