Candidatus Desulfobacillus denitrificans: DSYM_04570
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Entry
DSYM_04570 CDS
T07109
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
ddz
Candidatus Desulfobacillus denitrificans
Pathway
ddz00260
Glycine, serine and threonine metabolism
ddz00460
Cyanoamino acid metabolism
ddz00630
Glyoxylate and dicarboxylate metabolism
ddz00670
One carbon pool by folate
ddz00680
Methane metabolism
ddz01100
Metabolic pathways
ddz01110
Biosynthesis of secondary metabolites
ddz01120
Microbial metabolism in diverse environments
ddz01200
Carbon metabolism
ddz01230
Biosynthesis of amino acids
ddz01240
Biosynthesis of cofactors
ddz04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
ddz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
DSYM_04570
09102 Energy metabolism
00680 Methane metabolism
DSYM_04570
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
DSYM_04570
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
DSYM_04570
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
DSYM_04570
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
DSYM_04570
Enzymes [BR:
ddz01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
DSYM_04570
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Cys_Met_Meta_PP
Aminotran_5
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
BBO19758
UniProt:
A0A809QYZ2
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All DBs
Position
460533..461783
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AA seq
416 aa
AA seq
DB search
MFSRKNTLAKVDAELFAAIEAENRRQEEHIELIASENYVSQAVLEAQGSQLTNKYAEGYP
GRRYYGGCEHVDVAELLAIERAKKLFGADCANVQPNSGSQANQAVFFAFLKPGDTILGMN
LSMGGHLTHGMPLNISGKWFNIVPYGLDEKEEIDYAEMERLAREHKPKLIIAGASAYALR
IDFERFARVAKEVGAIFMVDMAHYAGLVAAGVYPNPVPHADVVTTTTHKTLRGPRGGLIL
MKAEHEKAINSAIFPGIQGGPLMHVIAGKAVALKEAMTSEFRDYQEQVLANTRVMARVLS
EERGLRIVSGRTESHVFLVDLRAKNLTGKEAEAALGRAHITVNKNTIPNDPQKPLVTSGI
RIGAPAITTRGFTEIESETVAHLIADVLDHPNDEAAIARVRGKVAELCKKFPVYGA
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgttctccagaaaaaacaccctcgccaaggtcgacgctgagctgtttgccgcgatcgag
gccgaaaaccgccgccaggaagaacacatcgagctgatcgcttccgagaactacgtcagc
caggccgtgctcgaggcgcagggctcgcagctcaccaacaagtacgccgagggctatccc
ggcaggcgctactacggcggctgcgagcatgtcgacgtcgccgagctgctggccatcgag
cgcgcgaagaagctgttcggcgccgactgcgccaacgtgcagccgaattccggctcgcag
gccaaccaggcggtgttcttcgccttcctcaagccgggcgacaccatcctcggcatgaac
ctctcgatgggcggccacctcacccacggcatgccgctcaacatcagcggcaagtggttc
aacatcgtgccctacggcctcgacgagaaggaagagatcgactacgccgagatggagcgg
ctggcgcgcgagcacaagccgaagctgatcatcgccggcgcctcggcctacgccctgcgc
atcgacttcgagcgcttcgccagggtggcgaaggaagtcggcgcgatcttcatggtggat
atggcgcactacgccggcctcgtcgccgccggcgtctacccgaatccggtgccgcacgcc
gacgtcgtcaccaccaccacgcacaagaccctgcgcggcccgcgcggcggcctcatcctc
atgaaggccgagcacgagaaggccatcaactcggcgatctttcccggcatccagggcggc
ccgctgatgcacgtcatcgccggcaaggcggtggcgctgaaggaggccatgacctccgag
ttccgcgactaccaggagcaggtgctcgccaacacccgcgtcatggcgcgcgtgctgtcg
gaagagcgcggcctgcgcatcgtctccggccgcaccgagagccacgtcttcctggtcgac
ctgcgcgccaagaacctcaccggcaaggaggccgaggcggcgctgggccgcgcccacatc
acggtcaacaagaacaccatccccaacgatccgcagaagccgctggtcacctccggcatc
cgcatcggcgcgccggccatcaccacccgcggcttcaccgagatcgagtcggaaaccgtc
gcccacctcatcgccgacgtgctcgaccacccgaacgacgaggcggccatcgccagggtg
cgcggcaaggtggccgagctctgcaagaagttccccgtctacggcgcctga
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