Candidatus Desulfobacillus denitrificans: DSYM_06540
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Entry
DSYM_06540 CDS
T07109
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
ddz
Candidatus Desulfobacillus denitrificans
Pathway
ddz00470
D-Amino acid metabolism
ddz00550
Peptidoglycan biosynthesis
ddz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ddz00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
DSYM_06540
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
DSYM_06540
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ddz01011
]
DSYM_06540
Enzymes [BR:
ddz01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
DSYM_06540
Peptidoglycan biosynthesis and degradation proteins [BR:
ddz01011
]
Precursor biosynthesis
Amino acid ligase
DSYM_06540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
MurD-like_N
Mur_ligase_C
NAD_binding_7
KR
Shikimate_DH
2-Hacid_dh_C
AdoHcyase_NAD
DUF1749
Motif
Other DBs
NCBI-ProteinID:
BBO19955
UniProt:
A0A809R6L8
LinkDB
All DBs
Position
657080..658468
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AA seq
462 aa
AA seq
DB search
MGNLAGKTVLVLGLGESGLAMVQWLVRQGARVRVADSRTEPPFAAELKRSAPGARLLAGS
FNDALLDGVGLIGLSPGLALNEPVVAEAARRGIPVVGEIELFAGALSALGARDRCKVIAI
TGTNGKTTTTALTGALCRAAGRVTAVAGNIGPAALSALMTCLDAGKLPEVWVLELSSFQL
ETTVSLAADAATVLNVSEDHFDRYAGLDDYAAAKAHIFAGGGAQVLNRQDARAMAMASAV
SRRLTFGLDAPSGADDFGLAEGWLMQGRERLLRVDELSLAGLHNAANALAALALCHAIGL
PLAPLLPALREFRGLPHRVERLAEIDGAAWYDDSKGTNVGATVAALEGLGRKVVLIAGGD
GKGQDFSPLGPALATHGRALVLIGRDAMRIEAAVADCGVPILHAQDMEQAVRKAAVAARA
GDAVLLSPACASFDMFRNYVHRAEVFAQAVRELAAIRQKEAI
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgggtaacctggcaggcaaaacggttctggtgctggggctcggcgagtcgggcctggcc
atggtgcaatggctcgtccgccagggtgcccgcgtgcgcgtcgccgattcgcgcaccgag
ccacccttcgccgccgagctgaagcgcagcgcgccgggcgcccggctgctggccggctcc
ttcaacgacgcgctgctcgatggggtcgggctgatcggcctctcgccgggcctcgccctc
aacgagccggtggtggcggaggcggcgcggcgcggcatcccggtcgtcggcgagatcgag
ctgttcgccggcgccctgagcgcgctcggcgcgcgcgaccgctgcaaggtgatcgccatc
accggcaccaacggcaagaccaccaccacggcgctgacgggcgccttgtgccgcgccgcc
ggccgggtgacggcggtggccggcaacatcggcccggcggcgctgtccgccctgatgacc
tgcctcgacgccggcaagctgccggaggtctgggtgctggaactgtcgagcttccagctc
gagacgacggtgagcctggcggccgacgccgccacggtgctgaatgtcagcgaggaccat
ttcgaccgctacgccggcctcgacgactatgccgccgccaaggcgcacatcttcgccggc
ggcggcgcgcaggtgctcaaccgccaggacgcgcgggcgatggcgatggccagcgccgtg
tcgcgcagactgacttttggcctcgacgcgccgtccggcgccgacgacttcggcctcgcg
gagggctggctgatgcagggccgggagcgcctgttgcgcgtcgacgaactgtcgcttgcc
gggctgcacaacgccgccaatgcgctggcggcgctggccctctgccacgccatcggcctg
ccgttggcgccgctgctgccggcgctgcgcgaattccgcggcctgccgcaccgcgtcgag
cgcctcgccgagatcgacggcgccgcctggtacgacgactcgaaaggcaccaacgtcggc
gctaccgttgcagcgctggaaggcctgggccgcaaggtggtgctgattgcgggaggggac
ggcaaggggcaggatttttcgccgctcggcccggcgctggcgacgcacggccgcgccctc
gtgctgatcggccgcgatgccatgaggatcgaggcggcggtggccgattgcggcgtgccc
atcctccacgcccaggacatggagcaggccgtgcgcaaggcggcggtggcggcccgcgcc
ggcgacgccgtgctgctctcgccggcctgcgccagcttcgacatgttccgcaattacgtc
catcgcgccgaagtctttgcgcaggccgtgcgcgagctggccgcgatacggcagaaggaa
gccatatga
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