Candidatus Desulfobacillus denitrificans: DSYM_10340
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Entry
DSYM_10340 CDS
T07109
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
ddz
Candidatus Desulfobacillus denitrificans
Pathway
ddz03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ddz00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
DSYM_10340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ddz03019
]
DSYM_10340
03009 Ribosome biogenesis [BR:
ddz03009
]
DSYM_10340
Messenger RNA biogenesis [BR:
ddz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
DSYM_10340
Ribosome biogenesis [BR:
ddz03009
]
Eukaryotic type
Pre-60S particles
RNases
DSYM_10340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
BBO20335
UniProt:
A0A809R7L3
LinkDB
All DBs
Position
1031896..1032441
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AA seq
181 aa
AA seq
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MAQDPNNLIWLDMEMTGLDPDRDRVIEIAMVATDGALNILAESPVMVIRQPDAVLEAMDD
WNKSTHGKSGLIDKVRASTTDEKAATDILLAFMREYVPERTSPMCGNSICQDRRFMARWL
PGLEAYFHYRNLDVSTLKELARRWKPEVFKGVVKRGAHTALADIHESIEELRYYRENFIR
L
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atggcacaggaccccaacaacctcatctggctggacatggagatgaccggcctcgacccc
gaccgcgacagggtcatcgagatcgccatggtggcgaccgacggcgcgctcaacatcctc
gccgaatcccccgtcatggtcatccgccagcccgacgccgtgctcgaggccatggacgac
tggaacaagagcacccacggcaagtcgggcctgatcgacaaggtgcgcgcgtcgacgacc
gacgagaaggcggcgacggacatcctgctggccttcatgcgcgaatacgtgccggagcgg
acttcgccgatgtgcggcaactcgatctgccaggaccgccgcttcatggcgcgctggctg
ccgggcctggaggcgtacttccactaccgcaacctcgacgtcagcacgctgaaggagctg
gcccggcgctggaagccggaggtcttcaagggcgtggtgaagaggggcgcgcacacggcg
ctggcggacatccacgagtcgatcgaggagttgcgctactaccgggagaatttcatcaga
ctgtag
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