Candidatus Desulfobacillus denitrificans: DSYM_12320
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Entry
DSYM_12320 CDS
T07109
Name
(GenBank) aminomethyl-transferring glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
ddz
Candidatus Desulfobacillus denitrificans
Pathway
ddz00260
Glycine, serine and threonine metabolism
ddz00630
Glyoxylate and dicarboxylate metabolism
ddz00785
Lipoic acid metabolism
ddz01100
Metabolic pathways
ddz01110
Biosynthesis of secondary metabolites
ddz01200
Carbon metabolism
Module
ddz_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
ddz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
DSYM_12320
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
DSYM_12320
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
DSYM_12320
Enzymes [BR:
ddz01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
DSYM_12320
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Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
BBO20533
UniProt:
A0A809QYN4
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All DBs
Position
complement(1221968..1224718)
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AA seq
916 aa
AA seq
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MLAAVGASSLDELIGQTVPAAIRLAQPLPLPGPLREHEALAKLKTIAAKNVVKKSLIGMG
YYDTLLPRVILRNLLENPGWYTAYTPYQAEIAQGRLEALLNWQQMVIDLTGMELANASLL
DEATAAAEAMTMARRASKSKSNAFFVDAACFPQTLDVVKTRAAYFGYELIVGPAAEAAKH
DVFGALLQYPNDSGECVDLTDVIAKLKVSGCITAVAADLMALVLLKSPGTMGADIALGSA
QRFGVPMGFGGPHAAFFACRDEHKRAVPGRIIGVSVDARGHRALRMALQTREQHIRREKA
NSNICTSQVLLANIAGMYAVYHGPQGLKTIAGRIHRLTGILAAGLKAADVKVLTQRWFDT
LHVETTAEVPGYNLRLVSQKVRGLSLDEKTTREDVAALLKAITGKETDIDKLDAQAAAND
PLAGLLRTDAILSHPVFGAHHTEHGMLRYLKRLQNKDLALDHSMISLGSCTMKLNATSEM
IPITWPEFGDLHPFAPADQAAGYAEMIGGLADSLKAITGFDAICMQPNSGAQGEYAGLVS
IRRYQAAQGEGHRNVCLIPKSAHGTNPATAQMCGLQVVVVDCDDSGNVDVADLKAKAESH
AANLSCLMLTYPSTHGVFEEAVKEICAVVHANGGQVYMDGANLNAQVGLTSPASIGADVS
HMNLHKTFAIPHGGGGPGMGPIGLKAHLAPYAPGHLLAADRVGAQGAVSAAPFGSASILP
ISWMYIAMLGGTGLKRATEVAILNANYVAARLKEHYPVLYTGSHGRVAHECILDIRAIKA
ATGIAEIDIAKRLMDYGFHAPTVSFPVAGTIMVEPTESESKGELDRFIAALANIREEIRK
VERGEWPAEDNPLKRAPHTQADLADAEWNRPYTRREAAFPLHWVAQNKFWPSVNRIDDVY
GDRNLFCACPPTEEYN
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atgctggccgccgtcggcgcttctagcctggacgagctgatcggccagacggtgcccgcc
gccatccgcctggcgcaaccgctgccgcttcccggcccgctgcgcgagcacgaggcgctg
gcgaagctgaaaaccatcgccgcgaagaacgtcgtcaaaaagtcgctcatcggcatgggc
tattacgacaccctgctgcccagggtgatcctgcgcaacctgctggagaatcccggctgg
tacaccgcctacacgccctaccaggcggagatcgcccagggccggctggaggcgctgctc
aactggcagcagatggtgatcgacctcaccggcatggagttggccaacgcttcgctgctc
gacgaggccaccgccgccgccgaagcgatgactatggcgcggcgggcctcgaagtcgaaa
tcgaacgccttcttcgtcgacgccgcctgcttcccgcagacgctcgacgtggtgaagacg
cgcgccgcttacttcggctacgagctgatcgtcggccccgccgcggaagccgcgaaacac
gacgtcttcggcgccctgctgcagtatccgaacgattccggcgaatgtgtcgacctgacc
gacgtcatcgccaaactgaaagtcagcggctgcatcacggcggtggcggccgacctgatg
gcgctggtgctgctcaagtcgcccggcaccatgggcgccgacatcgccctcggctccgca
cagcgcttcggcgtgccgatgggcttcggcggcccgcacgccgccttcttcgcctgccgc
gacgagcacaagcgcgccgtgccgggccgcatcatcggcgtctccgtcgacgcgcgcggc
caccgcgccctgcgcatggccctgcagacgcgcgagcagcacatccgccgcgagaaggcc
aactccaacatctgcacctcgcaggtgctgctcgccaacatcgccggcatgtatgccgtc
taccatggcccgcagggactgaagaccatcgccggccgcatccaccgcctcaccggcatc
ctcgccgcgggcctcaaggccgccgacgtgaaggtgctgacgcagcgctggttcgacacg
ctccatgtcgagacgaccgcggaggtgcccggctacaacctgcgcctggtgtcgcaaaag
gtgcgcggcctttcgctcgacgagaaaaccacgcgcgaggacgtcgcagccctgctgaag
gccatcaccggcaaggaaaccgacatcgacaagctcgacgcgcaggcggcggcgaacgat
ccgctcgcgggcctcctgcgcaccgacgccatcctctcccacccggtgttcggcgcgcac
cacaccgagcacgggatgctgcgctacctcaagcgcctgcagaacaaggacctcgcgctc
gaccattcgatgatctcgctcggctcctgcaccatgaagctgaacgccaccagcgagatg
atccccatcacctggcccgagttcggcgacctgcatcccttcgcccccgcggatcaagcc
gccggctacgccgagatgatcggcggcctcgccgacagcctcaaggccatcaccggcttc
gacgccatctgcatgcaacccaactccggcgcccagggcgagtatgccggcctcgtctcc
atccgccgctaccaggcggcgcagggcgaggggcaccgcaacgtctgcctgatcccgaaa
tcggcgcacggcaccaacccggccacggcgcagatgtgcggcctgcaggtggtggtggtc
gactgcgacgacagcggcaacgtcgacgtcgccgacctcaaggcgaaggcggagagccat
gcggctaacctctcctgcctgatgctcacctacccgtccacccacggcgtcttcgaggag
gcggtgaaggaaatctgcgcggtcgtgcacgccaacggcggccaggtgtacatggacggc
gccaacctcaacgcccaggtcgggctgacctcgccggccagcatcggcgccgacgtcagc
cacatgaacctgcacaagaccttcgccattccgcacggcggcggcgggcccggcatgggg
ccgatcgggctgaaggcgcacctcgcgccctacgcccccggccacctgctggcagccgac
cgcgtcggcgcgcaaggcgccgtcagcgccgcgcccttcggctcggcctcgatcctgccg
atctcctggatgtacatcgccatgctcggcggcacgggcctgaagcgcgccaccgaggtc
gccatcctcaacgccaactacgtcgccgcgcggctgaaggagcattaccccgttctctac
acgggcagccacggccgcgtcgcccacgagtgcatcctcgacatccgcgccatcaaggcg
gcgaccggcatcgccgagatcgacatcgccaagcgcctgatggactacggcttccacgcg
ccgacggtgagtttcccggtggccggcaccatcatggtcgagccgaccgagtcggagtcg
aagggggagctcgaccgcttcatcgccgcgctggccaacatccgcgaggagatccgcaag
gtcgagcgcggcgagtggccggcggaggacaacccgctcaagcgtgcgccgcatacccag
gccgacctcgccgacgccgaatggaatcgtccgtacacgcgccgcgaagccgcctttccg
ctgcactgggtggcgcagaacaagttctggccctcggtgaaccgcattgacgacgtgtac
ggcgaccgcaacctgttctgcgcctgcccgccgactgaggaatacaactga
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