Candidatus Desulfobacillus denitrificans: DSYM_12490
Help
Entry
DSYM_12490 CDS
T07109
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ddz
Candidatus Desulfobacillus denitrificans
Brite
KEGG Orthology (KO) [BR:
ddz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ddz03016
]
DSYM_12490
Enzymes [BR:
ddz01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
DSYM_12490
Transfer RNA biogenesis [BR:
ddz03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
DSYM_12490
Prokaryotic type
DSYM_12490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
BBO20550
UniProt:
A0A809QYP9
LinkDB
All DBs
Position
1238628..1239545
Genome browser
AA seq
305 aa
AA seq
DB search
MNQPRKPPRRRVDGVLLLDKPAGMTSNAALQKARRLLNAAKAGHTGTLDPMATGLLPLCF
GEATKFAGELLAADKAYAATLRLGVRTDTADAEGQVLETRPVAVTYEQAEAVLGRFRGDI
LQVPPMHSALKRDGRPLYEYARKGIEVERRPREVSIFSLVVRYFKGDRLEFDVDCSKGTY
VRSLAQDIGEALGCGAHLIALRRTRIGRLRLDEAVTLEALEALLPEARDDLLQPADALLA
GLPQLVLDEAAARRFSHGQPVRGPAGVPAGRLRVYADDGRFFGLGTLTPDGLVTPARLVT
AGIEK
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgaaccagccccgcaaaccgccgcgacgccgcgtcgacggcgttctgctgctcgacaag
ccggccggcatgacctccaacgcggccctgcagaaggcgcgccggctcctgaatgccgcc
aaggccggccataccggcacgctggacccgatggccaccggcctgctgcctctttgcttc
ggcgaggcgaccaaattcgccggcgaactgctggcggccgacaaggcctatgcagcgacg
cttcgcctcggggtgcgtacggacacggccgatgccgagggacaggtgctggagacccgg
cccgtggccgtgacctacgaacaggcggaggccgtgctaggtcgtttccggggcgacatc
ctccaagtgccccccatgcattcggcgctcaagcgtgatgggcgcccgctgtatgaatat
gccaggaagggcatcgaggtcgagcggaggccaagagaagtcagcattttctcgcttgtt
gttcgctatttcaaaggagatcgtctcgaattcgatgtggattgcagcaagggcacctat
gtgcgcagcctcgcccaggacatcggcgaggcgctcggctgcggagctcatctcatcgcc
ctgcggcgtacccgcatcggtcgcctgcgcctggacgaagcggtcacgctcgaggcgctg
gaagccctgctgcctgaagcgcgcgatgaccttttgcagcccgctgacgccctgttggca
ggattgccccaactggtactcgacgaggcagcggcaaggcggttttcccatggccagccg
gtgcgcggtccggctggagttccggccggtcgactgcgcgtctatgccgacgacggccgc
ttcttcggtctcggcaccctgaccccggatggcttggtgacaccggcccgcctagtgacg
gcaggcattgaaaaatag
DBGET
integrated database retrieval system
