KEGG   Candidatus Desulfobacillus denitrificans: DSYM_12530
Entry
DSYM_12530        CDS       T07109                                 
Name
(GenBank) type IIA DNA topoisomerase subunit B
  KO
K02622  topoisomerase IV subunit B [EC:5.6.2.2]
Organism
ddz  Candidatus Desulfobacillus denitrificans
Brite
KEGG Orthology (KO) [BR:ddz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ddz03032]
    DSYM_12530
   03036 Chromosome and associated proteins [BR:ddz03036]
    DSYM_12530
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:ddz02048]
    DSYM_12530
Enzymes [BR:ddz01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     DSYM_12530
DNA replication proteins [BR:ddz03032]
 Prokaryotic type
  DNA Topoisomerases
   DSYM_12530
Chromosome and associated proteins [BR:ddz03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    DSYM_12530
Prokaryotic defense system [BR:ddz02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    DSYM_12530
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c PBECR2 HATPase_c_3
Other DBs
NCBI-ProteinID: BBO20554
UniProt: A0A809S9Y4
LinkDB
Position
1243206..1245179
AA seq 657 aa
MSKKNAAYDEASFRVLKGLEPVRERPGMYTRTDSPMHIIQEVIDNAADEALAGYAKHIHV
TLHADGSVTVADDGRGIPVGPHPEELVPVVVLAFTRLHAGGKFDKKTGQTAYAFSGGLHG
VGVSVTNALSRRVEVEVRRDGKVHNVVFSENGEKISELEAGESCGRQTGTRVRAWPDAKY
FESAKLPVAELERLLRSKAVLLPGLIVTLETEQGGAAKTWRYPLGLQGYLEEVGSGVEAV
SPVYTGEKYAANDDESFAEGEGAAWAVGWFAEPVCAESYVNLIPTALGGTHESGLRAGVF
EAVKSFIEHHALLPRGIKLQQEDVCGRMSFILSARILDPQFQGQVKEKLNSREAVKLVSA
MIRDPLEIWLNNHLDAAKAIAQLAIKQAEARLRTAQKVEKKKSSGVAVLPGKLSDCESED
TADNELFLVEGDSAGGSAKMARNKETQAILPLRGKVLNAFEVDADRLFANAEIHDIAVAL
GVDPHPADAPDAVLDRLRYGKAVIMSDADVDGAHIQTLLLTLFYRHFPKLIARGHVYIAM
PPLYRVDVPASGKKRPAKRLYALDEGELEAMRDRLKKEGINPDAVEIGRFKGLGEMNPEQ
LRETTMDPATRRVLPVVLREGAEEVTKKMFTLLMAKGESAGRRGWMEEKGNEVEADV
NT seq 1974 nt   +upstreamnt  +downstreamnt
atgagcaagaagaacgccgcctacgacgaagcctccttccgcgtgctgaaaggcctcgag
ccggtgcgcgagcggcccgggatgtatacccgcaccgactcgccgatgcacatcatccag
gaagtcatcgacaacgccgccgacgaggcgctcgccggttacgccaagcatatccacgtc
acgctgcatgccgacggttccgtcacggtggccgacgacggccgcggcattccggtcggc
ccgcatcccgaggagctggtgccggtggtggtgctggccttcacgcgcctgcacgcgggc
ggcaagttcgacaagaaaaccggccagacggcctatgccttctccggcggcctgcacggc
gtcggcgtttccgtcacgaatgcattgtccaggcgcgtcgaggtcgaggtgcgccgcgac
ggcaaggtgcacaacgtcgttttctccgagaacggcgagaagatctccgaattggaagcc
ggtgagtcctgcggccgccagaccggcacgcgcgtgcgcgcctggccggatgcgaaatat
ttcgagtcggcgaaattgccggtggccgagctggagcgcttgttgcgctccaaggccgtg
ctgctgcccggcctgatcgtgacgctggaaaccgagcagggcggggcggccaagacctgg
cgctatccgctcggcctgcagggctacctcgaggaggtcggctcgggcgtagaagccgtc
tccccggtctacaccggcgagaaatatgccgccaacgacgacgagtccttcgccgaaggc
gagggcgcggcgtgggcggtgggctggttcgccgaaccggtctgtgccgagtcctacgtc
aacctcattccgaccgcgctcggcggcacgcacgagtcgggcctgcgcgccggcgtcttc
gaggcggtgaaatccttcatcgagcaccatgcgctgctgccgcgcggcatcaagctgcag
caggaggacgtctgcggccgcatgagcttcatcctctcggcacgcatcctcgatccgcag
ttccagggtcaggtgaaggagaagctcaattcgcgcgaggcggtgaagctggtctcggcg
atgatccgcgacccgctcgagatctggctcaacaaccacctcgatgccgcgaaagccatt
gcccagctcgccatcaagcaggccgaggcgcgcctgcgcacggcgcagaaggtcgagaag
aagaagtcctccggcgtcgccgtgctgccgggcaagctctccgactgcgagagcgaggac
accgccgacaacgagctgttcctcgtcgagggcgattccgccggcggctcggcgaagatg
gcgcgcaacaaggagacgcaggccatcctgccgctgcgcggcaaggtgctcaatgccttc
gaggtcgatgccgaccgcctcttcgccaatgccgagatccacgacatcgccgtggcgctc
ggcgtcgatccgcatcccgccgatgcgccggatgccgtgctcgaccgcctccgctacggc
aaggccgtcatcatgtccgacgccgacgtcgacggcgcccacatccagacgctgttgctg
acgctgttttaccggcacttcccgaagctgattgcgcgcggccacgtctacatcgccatg
ccgccgctctaccgcgtcgacgtgccggcctcgggcaagaagcgcccggccaagcgcctc
tacgcgctcgacgagggcgagctggaggcgatgcgcgaccgcctgaagaaggagggcatc
aatcccgacgccgtcgagatcggccgcttcaagggtttgggcgaaatgaaccccgagcag
ctgcgcgagaccaccatggacccggccacgcggcgcgtgctgccggtggtgctgcgcgag
ggcgccgaggaggtgacgaagaaaatgttcaccctgctgatggccaagggcgagtctgcc
ggccgccgcggctggatggaagagaagggcaacgaagtggaggcggatgtctga

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