Candidatus Desulfobacillus denitrificans: DSYM_20030
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Entry
DSYM_20030 CDS
T07109
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
ddz
Candidatus Desulfobacillus denitrificans
Brite
KEGG Orthology (KO) [BR:
ddz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ddz03032
]
DSYM_20030
03036 Chromosome and associated proteins [BR:
ddz03036
]
DSYM_20030
03400 DNA repair and recombination proteins [BR:
ddz03400
]
DSYM_20030
DNA replication proteins [BR:
ddz03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
DSYM_20030
Chromosome and associated proteins [BR:
ddz03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
DSYM_20030
DNA repair and recombination proteins [BR:
ddz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
DSYM_20030
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
CATASP
TetR_C_30
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
BBO21304
UniProt:
A0A809SB30
LinkDB
All DBs
Position
complement(2029880..2030164)
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AA seq
94 aa
AA seq
DB search
MTKSELIAKLAGRFPQLVAKDADYAVKMILDAMTAALTRGDRIEIRGFGSFALNYRPPRI
GRNPKSGEKVQVPEKHVPHFKAGKELRERVDQLD
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atgacgaagtcggaactcatcgcgaaactggcgggacgcttcccgcagctggtcgccaag
gatgccgattacgccgtcaagatgattctcgatgccatgaccgccgcgctcacccgcggc
gatcgcatcgagattcgcggcttcggcagctttgcgttgaactacaggccgccgcggatc
gggcgcaacccgaagtcgggcgagaaggtgcaggtgcccgagaagcacgtgccgcacttc
aaggcgggcaaggaactgcgcgagcgcgtagaccagctcgattga
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