Candidatus Desulfobacillus denitrificans: DSYM_27180
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Entry
DSYM_27180 CDS
T07109
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
ddz
Candidatus Desulfobacillus denitrificans
Pathway
ddz00300
Lysine biosynthesis
ddz00470
D-Amino acid metabolism
ddz01100
Metabolic pathways
ddz01110
Biosynthesis of secondary metabolites
ddz01120
Microbial metabolism in diverse environments
ddz01230
Biosynthesis of amino acids
Module
ddz_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
ddz_M00526
Lysine biosynthesis, DAP dehydrogenase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ddz00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
DSYM_27180
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
DSYM_27180
Enzymes [BR:
ddz01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
DSYM_27180
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
BBO22019
UniProt:
A0A809R395
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All DBs
Position
2782207..2783451
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AA seq
414 aa
AA seq
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MNPFAYRDGTLCAEDVPLPQIAAAYGTPCYVYSRAALQSRFEEFRQALAGRNAMVCYAVK
ANSNLAILNLFARAGAGFDIVSGGELARVVAAGGDPARVVFSGVGKTVDEIRMALDKGIF
CFNVESAAELERLSEIAGRAGKRAPIALRVNPDVDPKTHPYISTGLRHNKFGVAYTEALE
LYRRARRLPHLEIAGIACHIGSQLLDPAPAAEAAGKILALADRLAAEGIVLRHLDLGGGI
GIRYRDETPPSVAEYLAPILAQLTGRREKVLFEPGRALVGNAGLLLARVEHLKHGEERNF
AVIDAAMNDLMRPALYDAWHDILPVRQGSGETAEYEVVGPVCESGDFLGHGRSLAVAAGD
LLAIMSAGAYGMAMSSNYNSRPRAAEIMADGDRFHLVRERERIEQLFAGERILP
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgaatccctttgcctaccgcgacggcaccctctgtgccgaggacgtgcccctgccgcag
atcgccgcggcctacggcacgccctgctacgtctactcgcgcgcggcgctgcagtcgcgc
ttcgaagaattccgccaggcgctggccggccgcaatgcgatggtctgctacgccgtcaag
gccaactcgaacctcgccatcctgaacctgttcgcccgcgccggcgccggcttcgacatc
gtatccgggggcgagctggcgcgcgtcgtcgccgccggcggcgatcccgccagagtggtg
ttctcgggcgtcggcaagacggtcgacgagatacgcatggccctcgacaagggcatcttc
tgcttcaatgtcgagtccgccgccgaactggagcgactcagcgagatcgccggccgggcc
ggcaagcgggcgccgattgccctgcgcgtcaaccccgacgtcgaccccaagacccacccc
tacatttccaccggcctgcgccacaacaagttcggcgtcgcctacaccgaggcgcttgaa
ctgtaccggcgcgcccgcagattgccgcacctcgagattgccggcatcgcctgccacatc
ggctcgcagctgctcgatccggcgccggcggcggaggcggccggcaagatcctcgcgctc
gccgaccgcctcgccgccgagggcattgtcctgcggcatctcgatctgggcggcggcatc
ggcatccgctatcgcgacgaaacgccgccgtccgtcgccgagtacctggcgccgatcctg
gcgcaactcaccggccgccgggaaaaggtgctcttcgagccgggccgcgcgctggtcggc
aacgccggcctcctgctcgcccgtgtcgagcacctcaagcacggcgaggagaggaatttc
gccgtcatcgatgccgccatgaacgacctgatgcggcccgcgctgtacgacgcctggcac
gacatcctgccggtgcgccaaggcagcggcgaaacggcggaatatgaagtcgtcgggccc
gtctgcgaatccggcgacttcctgggccacggtcgttcgctggcggtcgccgcgggcgac
ctgctggcgatcatgtcggccggcgcctatggcatggcgatgagctcgaattacaattcg
cggccgcgcgccgcggaaatcatggccgacggcgaccggttccatctcgtgcgcgagcgc
gagcggatcgagcaactcttcgccggcgagcggatcctgccgtga
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