Candidatus Desulfobacillus denitrificans: DSYM_27340
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Entry
DSYM_27340 CDS
T07109
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
ddz
Candidatus Desulfobacillus denitrificans
Pathway
ddz00300
Lysine biosynthesis
ddz00470
D-Amino acid metabolism
ddz01100
Metabolic pathways
ddz01110
Biosynthesis of secondary metabolites
ddz01120
Microbial metabolism in diverse environments
ddz01230
Biosynthesis of amino acids
Module
ddz_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ddz00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
DSYM_27340
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
DSYM_27340
Enzymes [BR:
ddz01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
DSYM_27340
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
BBO22035
UniProt:
A0A809RCE9
LinkDB
All DBs
Position
complement(2798481..2799314)
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AA seq
277 aa
AA seq
DB search
MRIKFTKMHGLGNDFVVLDAVNQAIDLTPARARFLADRHFGVGCDQILVVEPSARPDADF
RYRIFNADGGEVEQCGNGARCFVRFVHDKGLTAKRAIRVETRGGLIEPRLEHDGLVTVDM
GVPRFEPSHVPFVTGSDALVQPLQLDGAGVDITALSMGNPHAVQAVANVDTAPVAEQGPL
IENHPRFPQRVNAGFMQVVDRHAIRLRVYERGAGETLACGSGACAAVVAGIARGLLDSPV
RVAMRGGELTIAWGGPGQPVRMTGPAVTVFDSEIEIQ
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
gtgcggattaaattcaccaagatgcacggcctcggcaacgacttcgtcgtgctcgacgcc
gtcaatcaggccatcgacctgacgccggcgcgggcgcgcttcctcgccgaccgccatttc
ggcgtcggctgcgaccagatcctcgtcgtcgagccttcggcgcgccccgacgccgacttc
cgctaccgcatcttcaacgccgacggcggcgaggtcgagcagtgcggcaacggcgcgcgc
tgcttcgtgcgtttcgtgcacgacaagggcctgacggcgaagcgcgccatccgcgtcgag
acgagaggcggactcatcgagccgcgcctggagcacgacggcctcgtcacggtggacatg
ggcgtgccgcgcttcgagccctcgcacgtgcccttcgtcaccgggagcgacgccctggtg
cagccgctgcagctcgacggcgccggcgtcgacatcaccgccctgtcgatgggcaacccg
cacgcggtgcaggcagtggcgaacgtcgacaccgcccccgtcgccgaacaggggccgctg
atcgagaaccacccgcgctttccgcagcgggtgaacgccggcttcatgcaggtggtcgac
cgccacgcgatcaggctgcgcgtctacgagcgcggcgccggcgagacgctggcctgcggc
agcggcgcctgcgccgccgtcgtcgccggcatcgcccgcggcctgctcgactcgccggtg
cgggtggccatgcgcggcggcgaactgaccatcgcctggggcgggccgggccagccggtg
cggatgaccggcccggcggtgacggtgttcgacagcgaaatcgaaattcaatga
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