Candidatus Desulfobacillus denitrificans: DSYM_27570
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Entry
DSYM_27570 CDS
T07109
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
ddz
Candidatus Desulfobacillus denitrificans
Pathway
ddz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ddz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DSYM_27570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ddz03400
]
DSYM_27570
Enzymes [BR:
ddz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DSYM_27570
DNA repair and recombination proteins [BR:
ddz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DSYM_27570
RecFOR pathway proteins
DSYM_27570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
AAA_16
Mg_chelatase
AAA_22
nSTAND3
AAA_3
DUF815
AAA_14
Rad17
AAA_2
NTPase_1
TsaE
AAA_18
AAA_17
RNA_helicase
IstB_IS21
AAA_24
Bac_DnaA
AAA_28
NB-ARC
Polysacc_deac_2
bpMoxR
AAA_33
NACHT
ABC_tran
AAA_25
PaRep2b
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
BBO22058
UniProt:
A0A809R5U4
LinkDB
All DBs
Position
2819212..2820249
Genome browser
AA seq
345 aa
AA seq
DB search
MIETDRLISAAPESSQEAQIERALRPRKLEEYVGQQKIREQLSIFIEAARKRGEALDHVL
LFGPPGLGKTTLAHIVAHEMGVNLRHTSGPVLERAGDLAAILTNLEPHDVLFIDEIHRLS
PVVEEILYPALEDFQIDIMIGEGPAARSVKLDLPPFTLVGATTRAGMLTNPLRDRFGIVS
RLEFYTPEELTKIVTRSSQLLNVDIAAEGAFEIARRARGTPRIANRLLRRVRDFAEVKAE
GAITREVADAALTMLDVDRAGLDVMDRKLLGAVLEKFAGGPVGLDNLAAAIGEVRDTIED
VLEPYLIQQGYLQRTPRGRMATVATWRHFGLAAPGPGGSGELWNE
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgatcgagaccgaccgcctgatttccgccgcacccgaatcctcgcaggaagcgcagatc
gagcgcgccctgcgtccgcgcaagctggaggaatacgtcggccagcagaagatccgcgag
cagctctccatcttcatcgaagcggccaggaagcgcggcgaggcgctcgaccacgtcctg
ctgttcggcccgccggggctgggcaagaccacgctggcccacatcgtcgcccacgagatg
ggcgtcaatctgcgccacacttccggcccggtgctggagcgcgccggcgacctggcggcg
atactgaccaacctcgagccgcacgacgtgctgttcatcgacgagatccaccgcctctcg
ccggtggtcgaggagatcctctacccggcgctggaggatttccagatcgacatcatgatc
ggcgagggcccggcggcgcgctcggtgaagctcgacctgccgccgttcaccctggtcggc
gccaccacccgcgccggcatgctgaccaacccgctgcgcgaccgcttcggcatcgtctcg
cgcctggagttctacacgccggaggaattgacgaagatcgtcacgcgctcctcccagctt
ctcaacgtcgacatcgccgccgagggcgccttcgagatcgcccgccgcgcgcgcggcacg
ccgcgcatcgccaaccgcctgctgcgccgcgtgcgcgacttcgccgaggtgaaggccgag
ggcgccatcacgcgggaagtggccgacgccgcgctgaccatgctcgacgtcgaccgcgcc
ggcctcgacgtcatggaccgcaagctgctcggcgccgtgctggagaagttcgccggcggc
ccggtcggcctcgacaacctggcggcggcgatcggcgaagtgcgcgacaccatcgaggac
gtgctcgagccctatctgatccagcagggctacctgcagcgcacgccgcgcggccgcatg
gccaccgtcgccacctggcgacatttcggcctcgccgcgcccggcccgggcggcagcggc
gaactctggaacgaataa
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integrated database retrieval system
