Candidatus Desulfobacillus denitrificans: DSYM_29120
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Entry
DSYM_29120 CDS
T07109
Name
(GenBank) penicillin-binding protein 2, partial
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
ddz
Candidatus Desulfobacillus denitrificans
Pathway
ddz00550
Peptidoglycan biosynthesis
ddz01100
Metabolic pathways
ddz01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
ddz00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
DSYM_29120
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
DSYM_29120
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ddz01011
]
DSYM_29120
Enzymes [BR:
ddz01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
DSYM_29120
Peptidoglycan biosynthesis and degradation proteins [BR:
ddz01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
DSYM_29120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
bDLD3
Motif
Other DBs
NCBI-ProteinID:
BBO22213
UniProt:
A0A809R3N5
LinkDB
All DBs
Position
complement(2970848..2972743)
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AA seq
631 aa
AA seq
DB search
MRLAEFRNPEQELERFQRRLAVAGGFVLLAFFLLFLRFSWLQVVQHEHYRTRAEDNRISL
VPIVPNRGVIADRNGLVLARNYSAYTLEITPGKVADLEAVINALAAIVDIQPKDRKRFRK
LLEESKNFESLPIRTRLSDEEVARFIAQRFRFPGVEIKARLFRQYPQGELASHALGYIGR
VNDRDLEKIGDREQENNYRGTEHFGKTGLEQKYEFELHGQTGFEQVEVDAGGHAVRVLER
TPPVSGNNLTLTLDAKLQQVVEKAFGKRRGALVAIEPSTGGILALVSMPGYDPNLFVDGI
NPQDWEWLNTSEDKPMVNRALNGAYPPGSTFKPFMALAALETGKRTPQQTIADPGFFNFG
GHTFRDDKKGGHGLVDMYKSIVHSCDTYYYLLANDMGIDAIANFMRQLGLGSRTGIDIEG
ESEGVLPSQEWKRKRFRKPEQQKWYAGETISIGIGQGYNAYTPIQLAQATAALANNGVMY
RPHLVKYIENINTGERTPIEPEPMRTVPLKPANLEVIRQAMVGVNKEGTGARAFAGAEYV
SAGKTGTAQVFSLKGGKYEHGKVHERLRDHALFIAFAPADQPKIALAVLVENGGFGAQSA
APIARQVLDYYLLGKLPKEAAAEDEESGEDD
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
gtgcgactggcggagttcaggaatccggaacaggagctcgagcgcttccagcggcgcctg
gccgtggcgggcggattcgtcctgctggccttcttcctgctcttccttcgcttctcctgg
ctgcaggtggtgcagcacgagcattaccggacgcgcgccgaggacaaccgcatttcactg
gtgccgatcgtgcccaaccgcggggtcatcgccgaccgcaacgggctcgtcctggcgcgc
aactattccgcctacaccctggaaatcacgccgggcaaggtggccgacctggaggccgtc
atcaacgcgctggccgccatcgtggacatccagccgaaggaccgcaagcgcttccgcaag
ctgctcgaggaaagcaagaacttcgaatcgctgccgatccgcacgcggctctccgacgag
gaggtggcgcgcttcatcgcccagcgcttccgctttcccggggtggagatcaaggcgcgc
ctgttccgccagtatccccagggcgagctggcctcgcatgcgctgggctacatcggccgc
gtgaacgaccgcgacctggaaaagatcggcgaccgcgagcaggagaacaactatcgcggc
acggaacacttcggcaagaccgggctggaacagaaatacgagttcgagctgcacgggcag
accggcttcgagcaggtcgaggtcgatgccggcgggcacgccgtgcgcgtgctggagcgc
acgccgccggtgtccggcaacaacctgacgctgacgctcgacgcgaaactgcagcaggtg
gtggaaaaggccttcggcaagcgccgcggcgcgctggtggcgatcgagccgtcgacgggc
ggcattctcgcgctggtgtcgatgcccggctacgatcccaacctgttcgtcgacggcatc
aatccgcaggactgggagtggctgaatacctccgaggacaagccgatggtgaaccgggcg
ctcaacggcgcctatccgcccggctcgaccttcaagcccttcatggcgctggcggcgctg
gagacgggcaagcgcacgccacagcagacgattgccgatcccggcttcttcaatttcggc
ggccacaccttccgcgacgacaagaagggcgggcacggcctcgtcgacatgtacaagtcg
atcgtgcattcctgcgatacttattactacctgctcgccaacgacatgggcatcgacgcc
atcgccaatttcatgcgccagctcggcctcggcagccgcaccggcatcgatatcgagggc
gaatccgagggcgtgctgccatcgcaggaatggaagcgcaagcgctttcgcaagcccgag
cagcagaagtggtatgccggcgaaaccatttccatcggcatcggccagggctacaacgcc
tacacgccgattcagctggcgcaagccaccgcggccctggccaacaacggcgtgatgtat
cggccgcatctggtgaaatacatcgagaacatcaacaccggcgagcgcaccccgatcgaa
cccgagcccatgcgcaccgtcccgctcaagccggccaacctcgaggtcatccggcaggcc
atggtcggcgtcaataaggaaggcactggcgcgcgcgccttcgccggcgccgaatacgtc
tccgccggcaagaccggcacggcgcaagtgttcagcctgaaaggcggcaagtacgagcac
ggcaaggtgcacgaacgcctgcgcgaccatgcgctgttcatcgccttcgccccggccgac
cagccgaagatcgccctggcggtgctggtggaaaacggcggcttcggcgcgcagtcggcc
gcgccgatcgcgcgtcaggtgctggactattacctgctcggcaagctgccgaaggaagct
gccgccgaggacgaggagagcggcgaggatgactga
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