Candidatus Desulfobacillus denitrificans: DSYM_29920
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Entry
DSYM_29920 CDS
T07109
Name
(GenBank) nodulation factor ABC transporter ATP-binding protein NodI
KO
K09695
lipooligosaccharide transport system ATP-binding protein
Organism
ddz
Candidatus Desulfobacillus denitrificans
Pathway
ddz02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ddz00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
DSYM_29920
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ddz02000
]
DSYM_29920
Transporters [BR:
ddz02000
]
ABC transporters, prokaryotic type
ABC-2 type and other transporters
Lipooligosaccharide transporter
DSYM_29920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_15
YAcAr
AAA_23
AAA_16
Motif
Other DBs
NCBI-ProteinID:
BBO22293
UniProt:
A0A809R3W3
LinkDB
All DBs
Position
3041662..3042696
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AA seq
344 aa
AA seq
DB search
MDTLNVNGLAKSYGSTAVLQGLTFELRPGECYGLLGPNGAGKTTTLRCALGLTAPDAGTI
RLAGLPVPERAREARSRVGIVPQMDNLDPDFTAAENLLVYGRYFGLPDRAVHERIPRLLE
FAGLGGRAEAKINTLSGGMKRRLTLARALVNDPDILFLDEPTTGLDPQARHLIWERLKQL
LAQGKTVLLTTHFMDEAERLCHRLAIMDRGRFIAEGSPREVIAAHIEPEVVEVYGEPGGA
PAGPPQGGAAKDMEQAQPANEQHPLPRERGRGDGSLMSAADWAREEAAQFATRVEVTGET
AFCYLTESAPLLRHLAGRQGLRYLHRPANLEDVFLKLTGRDLRD
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
gtggacacgctgaacgtcaacggcctcgccaaatcctacggcagcaccgccgtgctgcag
ggactgactttcgagctgcgcccgggcgagtgctacggcctgctcggtccgaacggcgcc
ggcaagaccaccacgctgcgctgcgcgctcggcctcaccgcgccggacgccggcacgatc
cgcctcgccggcctgccggtgcccgaacgcgcgcgcgaggcgcgcagccgcgtcggcatc
gtgccgcagatggacaacctcgaccccgatttcacggcggcggagaacctgctggtgtac
ggccgctacttcggcctgcccgaccgcgcggtgcacgagcgcatcccgcgcctgctcgaa
ttcgccggcctcggcggccgcgccgaggcgaagatcaacacgctctccggcggcatgaaa
cggcgcctgacgctggcgcgcgcgctggtgaacgacccggacatcctgttcctcgacgag
ccgaccaccggcctcgacccgcaggcgcgccacctgatctgggagcgcctcaagcagctc
ctggcgcagggcaagacggtgctgctcacgacgcacttcatggacgaggccgagcgcctc
tgccaccgcctcgccatcatggaccgcggccgcttcatcgccgagggcagcccgcgcgaa
gtgatcgccgcgcacatcgagccggaggtggtggaggtgtacggcgagccgggcggcgct
cccgccgggccgccccaagggggcgcagccaaggacatggagcaggcgcagcctgcgaac
gaacagcacccccttcctcgggaaagggggcggggggatggcagtttgatgagtgccgcc
gactgggcacgcgaagaggcggcgcagttcgccacgcgcgtcgaagtcaccggcgagacg
gccttctgctacctgacggaatcggcccccctgctgcgccacctcgccggccggcagggt
ctgcgctacctgcatcgcccggcgaacctcgaggatgtcttcctgaagctcaccggccgc
gacctgcgcgactag
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