Devosia ginsengisoli: FPZ08_00490
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Entry
FPZ08_00490 CDS
T06120
Name
(GenBank) pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
dea
Devosia ginsengisoli
Brite
KEGG Orthology (KO) [BR:
dea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dea03009
]
FPZ08_00490
Enzymes [BR:
dea01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
FPZ08_00490
Ribosome biogenesis [BR:
dea03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
FPZ08_00490
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
SYY_C-terminal
Motif
Other DBs
NCBI-ProteinID:
QDZ09360
UniProt:
A0A5B8LQA3
LinkDB
All DBs
Position
89736..91439
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AA seq
567 aa
AA seq
DB search
MSDTAPAKPSTGDRLAKVIARSGLCSRRDAEVWITEGRVVVNGKKVLTPAFNVTDRDKIM
VDGAPLAARQGTRVWLYHKPAGLVVTEKDPEGRETIFEHLETHGLPRVVTVGRLDINTEG
LLLLTNDGGLKRVLELPATGWLRRYRVRAHGTVTQAALDKLKDGIEIDGIKYGSIEATLE
REQGANVWLVLALREGKNREVKNVLGALGLEVNRLIRVSYGPFQLGDIPVGGVETIKARM
LRDQLGKKLADAADVDFDSEMPAEANALVGKPTRDRLTGRGTNTVEIARQRFRFTDGAEK
TEEELHAERPRQDRPGRFDSRKPTPKRDDARDDDYAPPPRRIHFDEDGRAPEDFVAKRNT
RIVKRPDRDDQSAKSFGKPAPRPAGKPSGDKKSFGDKKPFGKKPFEKKPFGDKPRGPRRD
DDATRGARHQRDREFTGTPRGPRRGDAAAAERPAYAPRLRPDSERGEGAAFKGEAKRPGR
NFSDKPKSFRPEGKSARPAGGRPTRPGRDELGSEAKTYGKPRMRPDGKPMPKRNGAAPQR
APRPGGRPTGGAGRPGGRPAAPRRPKA
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacactgctcccgccaaaccctccaccggcgaccgcctcgccaaggtcatcgcc
cgttccggcctctgctcccgccgcgatgccgaagtgtggatcaccgagggccgggtcgtc
gtcaacggcaagaaggtgctgacgcccgccttcaacgtcaccgaccgcgacaagatcatg
gtcgatggcgcgcctctggcggcccgccagggcacccgcgtctggctttaccacaagccg
gcgggcctcgtggtcaccgagaaggatcccgaaggccgcgagaccattttcgagcatctc
gaaacccatggcctgccccgtgtcgtcaccgtcggccgcctcgatatcaataccgaaggc
ctgctgctgctgaccaatgatggcggcctcaagcgcgtcctcgaactgcccgccaccggc
tggctgcgccgctaccgcgtgcgcgcccatggcaccgtcacccaggcggcgctcgacaag
ctcaaggacggcatcgagatcgacggcatcaaatacggctccatcgaagccacactggag
cgtgagcagggcgccaatgtctggctggtcctggccctgcgcgaaggcaagaaccgcgag
gtcaagaatgtcctcggcgccctcggcctcgaggtcaatcgcctgatccgcgtcagctac
ggcccgttccagctcggcgatatcccggtcggcggcgtcgaaaccatcaaggccaggatg
ctgcgcgaccagctcggcaagaagctggccgatgccgccgatgtcgatttcgacagcgaa
atgcccgccgaagccaatgcgctggttggcaagccaacgcgcgatcgcctcaccggccgc
ggcaccaacaccgtcgagatcgcccgccagcgcttccgcttcaccgacggcgccgaaaag
accgaggaagaactgcacgccgaacgtccgcgccaggatcgccccggtcgtttcgacagc
cgcaagcccacgcccaagcgcgatgacgcccgcgacgacgactacgccccgccgccccgc
cgcattcatttcgatgaagatggccgcgccccggaagacttcgtcgccaagcgcaatacc
cgcatcgtcaagcgccccgatcgtgacgaccagtccgccaaaagcttcggcaaacccgcg
ccgcgcccagccggcaagccatccggcgacaagaagagcttcggcgacaagaagcctttc
ggcaaaaagcccttcgagaaaaagccgtttggcgacaaaccccgtggcccgcgtcgtgac
gacgatgcgacgcgcggcgcgcgtcatcagcgtgatcgcgaattcaccggcaccccgcgc
ggtccccgtcgcggcgatgccgccgccgccgaacgccccgcctatgcgccgcgcctccgc
cccgacagcgaacgcggcgaaggcgccgccttcaagggcgaggccaagcgccccggccgc
aacttctcggacaagcccaaaagcttccgccccgaaggcaagtccgcgcgccccgctggc
ggccgcccgacccgccccggccgcgacgaactcggctccgaggcgaaaacctacggcaag
ccccgcatgcgcccggatggcaagcccatgcccaagcgcaacggcgccgccccccagcgc
gcgcccaggccgggtggccgtcccaccggcggggcagggcgcccgggtggccgtcccgct
gccccgcgtcgccccaaggcctag
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