Devosia ginsengisoli: FPZ08_00730
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Entry
FPZ08_00730 CDS
T06120
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
dea
Devosia ginsengisoli
Pathway
dea03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dea00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
FPZ08_00730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dea03400
]
FPZ08_00730
Enzymes [BR:
dea01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
FPZ08_00730
DNA repair and recombination proteins [BR:
dea03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
FPZ08_00730
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Apolipoprotein
RecJ_OB
DHQ_synthase
Motif
Other DBs
NCBI-ProteinID:
QDZ09398
UniProt:
A0A5B8LMF5
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All DBs
Position
complement(136625..138238)
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AA seq
537 aa
AA seq
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MADTLTNAAEFSVSEIAQAVKRTVEDEFGHVRVRGEISGFRGQHASGHAYFTLKDENAAI
DAVVWKTSYARLTFKPQEGLEVIATGRLTTFPRSSKYQIVIDNIEPAGAGALMALLEERR
RKLHAEGLFARERKRPLPYLPRVIGVVTSPTGAVIRDILHRLADRFPSHVLVWPVRVQGD
TCAPEVVNAIEGFNALLPDGPIPRPDLLIVARGGGSIEDLWGFNEEAVVRAVAASGIPII
SAVGHETDTTLVDYASDMRAPTPTAAAEAAVPVRTELIGYVDDLGSRQRQGARRIAGSAR
DRLRAASAGLPRPADLVSTQRQRLDHAASNLFAGLRHSVQDHRVRLSRVEPRLAPQLLAR
RQSEFGERLKNLALRADAGLRKTVDRARLTYDPRAERLGASALQLVERKRAQLAAIGPKL
SANTLRAELRHGQTRLGPLGTRLYASMLQGLSLRGAALAQAGKLLDSLSYKSVLARGYAV
IKDADGHLVHERAGLLPGAPIAIEFADGEVGATISGSPVIKKKPRPQSDGDAQESLF
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atggccgatactctgaccaatgccgccgaattttccgtcagcgagatcgcccaggcggtc
aagcgcacggtcgaggatgagttcggccatgtgcgcgtgcgcggcgagatttccggcttt
cgcggccagcatgcctcggggcacgcctatttcacgctgaaggacgagaatgcggcgatc
gacgccgtagtgtggaaaaccagctatgcccgcctgaccttcaagccgcaggaagggctc
gaagtcatcgccaccgggcggctgaccacttttccgcgctcgtcgaaataccagatcgtc
atcgacaatatcgagccggccggcgccggggcgctgatggcactgctggaagaacggcgg
cgcaagctccatgccgagggcctgttcgcgcgcgagcgcaagcgccccctgccctatctg
ccccgcgtcatcggcgtcgtcacttcgccgaccggggccgtgatccgggatattctgcat
cgtctggctgatcgctttcccagccatgtgctggtgtggccggtgcgtgtgcagggcgat
acctgtgcgcccgaagtggtcaacgccatcgagggttttaacgcgctgctgcccgatggg
ccgatcccccggcctgacctgctgatcgtggcgcgcgggggcgggtcgatcgaagacctg
tggggtttcaacgaggaagcggtggtgcgggcggttgccgccagcggcattcccatcatt
tccgctgtcggccacgagaccgatacgacgctggtcgactatgcctcggacatgcgcgcg
ccgacgccgacggcggccgccgaggccgcagtgccggtgcggaccgagctgatcggctat
gtcgatgaccttggctcgcgccagaggcagggcgcgcggcgcattgccggaagtgcccgc
gaccggttgcgcgccgccagtgccggcctgccgcgaccggccgacctggtttcgacccag
cgccagcggctggatcatgcggcgagcaatctgttcgccgggctgcgccattcggtgcag
gaccatcgcgtgcggttgtcgcgcgtcgaaccgcggctggcgccgcaattgctggcgcgg
cggcagtcggaattcggcgagcggctgaaaaacctggcgctgcgcgccgatgccgggctg
cgcaagaccgtggaccgggcgcgcctgacctatgatccgcgcgccgaacgcctgggggcc
tcggccctccagctggtcgagcgcaagcgggcgcaacttgcggcgatcgggcccaaactc
tcggccaatacgctgcgggcggagctgcgccatggccagacgcggctggggccgctgggg
acacgactttatgccagcatgctgcagggcctgagcctgcgcggcgcagcccttgcccag
gccggcaagctgctcgactcgctcagctacaagagcgtgctggcgcgcggctatgccgtc
atcaaggatgccgatggtcatctggtgcatgaacgggccggcctgctgcccggcgcgccc
attgccatcgaattcgccgatggcgaggtgggggcaacgatttcgggcagcccggtcata
aagaagaagccacgcccgcaatcggacggcgacgcacaggaaagcctcttttga
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