Devosia ginsengisoli: FPZ08_03080
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Entry
FPZ08_03080 CDS
T06120
Name
(GenBank) RsmB/NOP family class I SAM-dependent RNA methyltransferase
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
dea
Devosia ginsengisoli
Brite
KEGG Orthology (KO) [BR:
dea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dea03009
]
FPZ08_03080
Enzymes [BR:
dea01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
FPZ08_03080
Ribosome biogenesis [BR:
dea03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
FPZ08_03080
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Methyltransf_31
RsmF-B_ferredox
Ubie_methyltran
Methyltransf_25
MTS
FtsJ
PrmA
Methyltransf_15
PCMT
Motif
Other DBs
NCBI-ProteinID:
QDZ09814
UniProt:
A0A5B8LQB8
LinkDB
All DBs
Position
complement(625313..626605)
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AA seq
430 aa
AA seq
DB search
MRLPGRLSAAIAVLADVETRKRPVSEALKAWGLNNRFAGAGDRAAIGNLVYDALRRRASH
AALMGSDTPRALVLAVAVRDWGEDPAALSESFAGDNHAPEALSAEEMARAVGQLGDDVPG
FVLADVPEWLAPSLERGFGDNWIAEGQDMAGRPSLDLRVNSLKSSRERVMKSLARFTPEE
AAIAPLGVTMKAGPRDARTPNVTTDEGYLKGWFEVQDQGSQIVAALAGAQPGEQVLDLCA
GAGGKTLALAAAMMNKGQIFAYDSDRNRLAPIYDRLKRNGARNVQVRAPQPGALDDLVGK
MDRVVIDAPCTGTGTWRRRPDTKWKLTPELLSQRVGEQAAILAEGQRYLKPGGTLVYITC
SILPEENDEQIAGFLAGNPGFASVMPEDMWAAAFGTALPAGLATGKGGIALTPRLTGTDG
FYFNALRLVE
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctccccggtcgcctttctgccgccattgccgtgcttgccgatgtcgagacgcgc
aagcgccccgtttcggaagcgctgaaggcctgggggctcaacaaccgctttgccggggcc
ggcgaccgcgccgccatcggcaacctggtctatgacgcgctgcggcggcgggcctcgcat
gcggcgctgatgggcagcgatacgccaagggcgctggtgctggcggtggcggtgcgcgac
tggggcgaagacccggcggcgctgagcgagagctttgccggggataatcatgcgcccgag
gcgctgagcgcggaggaaatggcgcgggccgtcggtcaattgggcgatgatgtgcccggc
tttgtgctggcggatgtgcccgaatggctggcgccgtcgctggagcgcggcttcggcgac
aactggattgccgaggggcaggacatggccgggcggccatcgctggatctgcgggtcaac
agcctcaaatcgagccgcgagcgggtgatgaagtcgctggcgcgcttcacgcccgaggaa
gcggcgattgccccgctcggcgtgaccatgaaggccgggccgcgcgatgcgcggacgccc
aatgtcacgacggatgaaggctatctcaagggctggttcgaggtgcaggaccaaggcagc
cagatcgtggcggcccttgccggggcacaaccgggcgaacaggtgctggacctgtgtgcg
ggggccggcggcaagacgctggcgctggcggcggcgatgatgaacaaggggcaaatcttt
gcctatgacagcgaccgcaaccggctggcgccgatctatgatcggttgaagcgcaatggc
gcgcgcaatgtgcaggtgcgggcgccgcagccgggggcgctggacgatctcgtggggaag
atggatcgcgtggtgatcgacgcgccctgcaccgggacgggcacctggcggcggcggccg
gacaccaagtggaagctgacgccggagctgctgagccagcgcgtgggcgaacaggcggcg
attttggcggagggccagcgctatctgaaacccggcggcacgctggtctacatcacctgc
tcgatcctgccggaagaaaacgacgagcaaatcgcaggctttctcgcgggcaatccgggc
tttgcctccgtcatgcccgaagatatgtgggcggccgcctttggcaccgccctgcccgcg
ggcctggcgaccggcaagggcgggattgcgctgacgccgcgactgacaggtacggacggg
ttttatttcaacgctttgcggctggtggagtga
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