Devosia ginsengisoli: FPZ08_10355
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Entry
FPZ08_10355 CDS
T06120
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
dea
Devosia ginsengisoli
Brite
KEGG Orthology (KO) [BR:
dea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dea03032
]
FPZ08_10355
03400 DNA repair and recombination proteins [BR:
dea03400
]
FPZ08_10355
Enzymes [BR:
dea01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
FPZ08_10355
DNA replication proteins [BR:
dea03032
]
Prokaryotic type
DNA Topoisomerases
FPZ08_10355
DNA repair and recombination proteins [BR:
dea03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
FPZ08_10355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
QDZ11120
UniProt:
A0A5B8LUT8
LinkDB
All DBs
Position
complement(2112168..2113262)
Genome browser
AA seq
364 aa
AA seq
DB search
MRLVRIGRDELTLTRQRRGKGFCYRDAGGVLIRDAATRDRIKTLGIPPAWSYVRIAPSPK
AHIQALGVDEAGRDQYIYHPDWELRRDGKKQRRLAVLTSVLPRLRRKIAEALGAETGSRE
LALAIAATLIDKTAMRVGREKYLESNGTRGAGTLYARDIRVEGDEVCMAFNAKGGKRTEY
CLTDSRLAEAVGRIKTLPGKRLLVWRDEAGKVRPIKTGAINAWLRELAGVDISAKDFRTL
HASAMAGEALAQMEVGGSESMRRRQMAQVARQVADVLRNTPVICRKSLYRAAPVQAVQRR
QAQADVGSGRQWPRRPAAAREAAGRGTGGGVIYRGAVGVATPTLTPLSTRGREACSVAKP
SLEH
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgcggctggtcaggatcgggcgggatgagctgacgctgacccgccagcggcgcggcaag
ggtttctgttatcgcgatgccggcggagttttgatccgtgatgcggcgacgcgtgaccgc
atcaagacgctcggcattccgccggcctggagctatgtgcgcatcgcgcccagtcccaag
gcgcatatccaggcgcttggtgtcgatgaggcggggcgcgaccaatatatctatcacccc
gattgggaattgcgccgcgacggcaagaagcagcgccggcttgcggtgctgacatcggta
ttgccgcgcctgcggcggaagatcgccgaggcgctgggcgccgaaaccggcagccgcgaa
ctggcgctggccattgccgcgacgctgatcgacaagacggcgatgcgggtggggcgcgag
aagtatctcgaaagcaacggcacgcgcggcgccggcacgctctatgcccgcgatatcagg
gtcgagggcgacgaggtctgcatggcctttaatgccaagggcggcaagcggaccgaatat
tgcctcaccgatagcaggctggccgaggccgtcggccgcatcaagaccctgcccggcaag
cgcctgctggtctggcgcgatgaggcgggcaaggtgcggccgatcaagaccggggcgatc
aatgcctggctgcgggagttggccggggtcgatatttccgccaaggatttccggaccctg
catgccagcgccatggcgggcgaagccctggcgcagatggaggtgggcggctccgagagc
atgcgtcgccgccagatggcgcaggtcgcccggcaggtggccgacgtgctgcgcaatacg
ccggtcatctgccgcaagtccctatatcgcgccgcgcctgttcaagctgttcagcgaagg
caagctcaagccgatgtgggaagcggccggcaatggccgcgccggcctgctgcagcgcga
gaagcggctgggcgtggtactggcggcggggtgatctatcgtggtgcggtgggtgtggcc
acccccaccctcactcccctctccacaagggggagggaggcctgctctgtggctaaacca
tcattggagcactga
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