Devosia ginsengisoli: FPZ08_11540
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Entry
FPZ08_11540 CDS
T06120
Name
(GenBank) RluA family pseudouridine synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
dea
Devosia ginsengisoli
Brite
KEGG Orthology (KO) [BR:
dea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dea03009
]
FPZ08_11540
Enzymes [BR:
dea01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
FPZ08_11540
Ribosome biogenesis [BR:
dea03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
FPZ08_11540
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
QDZ11335
UniProt:
A0A5B8LU45
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All DBs
Position
2364109..2365149
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AA seq
346 aa
AA seq
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MVENTAAEFEGEEGEVQVVVVVDADMAGGRLDATLAKVHTVLSRNRIKDLILGGAASIDG
KPVSEPKYRLTAGETITLLAPPPEDAEPLPQDIPLDILYEDDQLIVVNKPVGMVVHPAPG
SPDGTLVNALLFHCGESLVGIGGVKRPGIVHRLDRDTSGVMVAAKTETAHRHLSEQFADH
GRTGPLHRAYIAFVWGMTETGKGTVDAPLGRDQNNRLKQAVRKDGREAITHYFVEARFGD
EGWDMTRVQCHLETGRTHQIRVHMAHIGHPLVADAVYASGFATKINRLPPDVAEPVQALG
RQALHAAELGFEHPVTGEEMLFEAPLPDDLQALEDALEGYDKAFAR
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atggtcgaaaataccgctgcagagttcgagggcgaggaaggcgaagtccaggtcgtggtc
gtcgtcgatgccgacatggccggcggacggctcgatgccaccctggccaaagttcacacc
gtgctgagccgcaaccgcatcaaggacctgatcctgggcggcgccgccagcatcgacggc
aaacccgtcagcgagcccaaataccggctaacggcgggcgagacaatcacccttcttgcc
ccacccccggaagatgccgagccgctgccgcaggatatcccgctcgacattctctatgag
gatgaccagctcatcgtggtcaacaagcccgtgggcatggtggtccaccctgcccccggt
tcgcccgatggcacgctggtcaatgcgctgcttttccattgcggggagagcctggtgggt
atcggcggggtcaagcggccgggcatcgtgcaccggctggaccgcgacacgtcgggcgtt
atggtggccgccaagaccgagacggcgcatcgccatctctccgagcaatttgccgatcat
ggccgcaccgggccgctgcatcgcgcctatatcgcctttgtctggggcatgaccgagacc
ggcaagggcacggtggatgcgccgctgggtcgcgaccagaacaaccggctgaaacaggca
gtgcgcaaggacggacgcgaggcgatcacccactatttcgtggaagcccgcttcggcgac
gaaggctgggacatgacaagggtgcagtgccacctcgaaaccggccgcacccaccagatc
cgcgtgcatatggcccatatcggccatccgctggtggccgacgcggtctatgcctcgggc
ttcgccaccaagatcaaccggctgcccccagacgtggccgagcctgtgcaggcgctggga
cggcaggctctgcatgcggccgagctgggattcgagcatcccgtgacgggcgaggaaatg
ctgttcgaggcaccactgcccgatgatttgcaggcgctcgaggatgcgctcgaaggatat
gacaaggcctttgcgcgctaa
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