Devosia ginsengisoli: FPZ08_11545
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Entry
FPZ08_11545 CDS
T06120
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
dea
Devosia ginsengisoli
Brite
KEGG Orthology (KO) [BR:
dea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dea03021
]
FPZ08_11545 (rpoH)
Transcription machinery [BR:
dea03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FPZ08_11545 (rpoH)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_11
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
QDZ11336
UniProt:
A0A5B8LTE5
LinkDB
All DBs
Position
2365311..2366180
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AA seq
289 aa
AA seq
DB search
MAQTNLPVLSAEGGLSRYLQEIRKFPMLEPDEEYMLAKRYKEHQDPGSAQKLITSHLRLV
AKIAMGYRGYGLPISEVISEGNVGLMHAVKRFEPEKGFRLATYAMWWIRAAIQEYVLRSW
SLVKIGTTAAQKRLFFNLRKVKGQIAALDDGSLHPDQIKQIATTLKVSEDDVVSMNARLS
GDASLNSPMRADEGSSEWQDWLVDDTPSQETTLGESEEFSERMGLLNNAMDVLNERERAI
FQARRLQDNPSTLEELAQQYDVSRERIRQIEVRAFEKVQDAVKEAARAS
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atggcccagaccaatcttcctgtcctctccgccgaaggggggctcagccgttatcttcag
gaaatccgcaagttccccatgctggaaccggatgaagaatacatgctggccaaacgctac
aaggaacatcaggatcccggctcggcgcagaagctgatcaccagccatctgcgcctcgta
gccaagatcgccatgggctatcgcggctatggcctgccgatttccgaagtcatttcggaa
ggcaatgtgggcctgatgcatgcggtgaagcgcttcgagcccgaaaaggggttccgactg
gcgacctatgccatgtggtggatccgcgccgccatccaggaatatgtgctgcgcagctgg
agcctggtcaagatcggcactaccgccgcccagaagcgcctgttcttcaacctgcgcaag
gtgaaggggcagatcgcggcgctggacgacggctcgctgcatcccgaccagatcaagcag
atcgccaccacgctcaaggtgagcgaggacgatgtcgtgtcgatgaatgcccgcctgtcg
ggcgatgcatcgctgaattcgcccatgcgggccgatgaaggctcgtcggaatggcaggac
tggctggtggacgacaccccgagccaggaaactaccctgggcgaaagcgaggaattttcc
gagcgcatggggctgctgaacaacgccatggacgtactgaacgaacgcgaacgcgccatc
ttccaggcccgccgcctgcaggacaatccgtccacgctcgaagagctggcccagcaatat
gacgtcagccgcgagcgcatccgccagatcgaggtccgcgcctttgaaaaggtgcaggac
gccgtgaaggaagcggcacgggcgagctga
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