Devosia ginsengisoli: FPZ08_12270
Help
Entry
FPZ08_12270 CDS
T06120
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
dea
Devosia ginsengisoli
Brite
KEGG Orthology (KO) [BR:
dea00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
dea01002
]
FPZ08_12270
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
dea01011
]
FPZ08_12270
Peptidases and inhibitors [BR:
dea01002
]
Cysteine peptidases
Family C82
FPZ08_12270
Peptidoglycan biosynthesis and degradation proteins [BR:
dea01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
FPZ08_12270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
PG_binding_3
Motif
Other DBs
NCBI-ProteinID:
QDZ11470
UniProt:
A0A5B8LVQ6
LinkDB
All DBs
Position
2504693..2506441
Genome browser
AA seq
582 aa
AA seq
DB search
MTWWRGRCSVAVHGVPMNKFLVCLVAALAGAGSALPALAQDVAGLAAGPVIIAPPQTPLA
QTIKSGLGAVYYSASRDSTAYNEAQKLYFFYGSRHFEPIWLDEAAKGEVVFSEPARKILK
LFENAASEGLRPSDYLTSDLNPAGAKGDPIKMAALETAFSGAALRYADHIYNGRIKPQSV
SANLDITPKPLDTAALLVQLATSADPVAVLTALEPTHPEFLALKAALATFDDTSLERPTP
IAEGPTLRPGMSDPRVPLLRARLDLPPADGLVYDDALVDALKAFQATLDLDVDGVMGPAT
LAALNGGIPVTRADILANMERWRWMPRDLGQFNVMVNVPEFRLAINRDGREEYTTRVVVG
TTKNQTPIFSDNIRHIVVNPYWNVPSSIIKGEVAPAVLRNPGYIDNQNMDLLYNGTPVSP
WQVDWTQVSTSNFPFRVRQRPGPGNALGQIKFLFPNKHDVYLHDTPSKSLFARSFRAYSH
GCVRVQNPMEFADALMANEANISRASLEAMFGPSERWVNPEHQIPVHIAYFTIRVEADGS
LRSFGDVYGHNAKLIAAMGLDKPDLAREIIADAEPVVDELSP
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgacgtggtggagaggccgctgcagcgttgccgtgcatggagttccgatgaacaagttc
ctggtctgcctcgtcgccgcccttgccggtgctggtagcgcattgcccgctttggcgcag
gatgtcgccggtcttgccgccggcccggtcatcatcgccccaccccagacgcccctggcc
cagaccatcaagtcgggcctcggcgccgtctattacagcgcctcgcgcgacagcaccgcc
tataacgaagcccagaaactctatttcttctatggcagccgccatttcgagcccatctgg
ctcgatgaggccgccaagggcgaggtggtcttttccgaacccgctcgcaagattctcaag
ctcttcgaaaatgccgccagcgagggcctgcgcccctccgactacctgacatcagatctc
aacccggccggcgccaagggcgacccgatcaagatggccgcgctcgaaaccgccttttcc
ggcgctgccctgcgctatgccgaccatatctataatggccgcatcaagccgcaatcggtc
agcgcaaatctcgatataacgcccaagccgctcgacaccgccgccctcctggtgcaactc
gccaccagcgccgatccggttgccgtgctgaccgcgctcgagcccacccatcccgaattc
ctggccctcaaggccgccctcgccactttcgacgataccagcctcgagcggccgacgccc
attgccgaaggccccaccttgcgccccggcatgagcgatccgcgcgtgccgctgctgcgc
gcccgcctcgacctgccgcccgccgacggcctcgtctatgacgatgctctcgtcgatgcg
ctcaaggccttccaggcgacgctcgatctcgatgtcgacggcgtcatgggcccggctacc
ctcgccgcactcaatggcggcatcccggtcacccgtgccgatatcctggccaatatggag
cgctggcgctggatgccgcgcgacctcggccagttcaacgtcatggtcaacgtccccgaa
ttccgcctggctatcaaccgcgacggacgcgaggaatacacgacccgcgtcgttgtcggc
accaccaagaaccagaccccgatcttctcggacaatatccgccacatcgtggtgaacccc
tattggaacgtgccctcgtccatcatcaagggcgaagtcgcacccgccgtgctgcgcaat
ccgggctatatcgacaaccagaacatggacctgctctataacggcacgccggtcagcccc
tggcaggtcgactggacccaagtctccaccagtaatttccccttccgcgtgcgccagcgc
cccggtccgggcaatgcgctggggcagatcaagttcctcttccccaacaagcacgacgtc
tatctccacgatacgccgtccaagtcgctgttcgcccgctccttccgcgcctatagccat
ggctgcgtgcgcgtgcagaacccgatggaatttgccgatgcgctgatggccaacgaggcc
aatatctcgcgcgcctcgctcgaagccatgttcggcccctccgagcgctgggtaaatccg
gaacaccagattccggtgcacatcgcctatttcaccatccgcgtcgaagccgacggctcc
ctgcgctccttcggcgacgtctatggccacaacgccaagctgatagccgccatgggcctc
gacaagcccgacctcgcccgcgaaatcatcgccgacgccgaacccgtcgtggacgaactg
tccccctga
DBGET
integrated database retrieval system
