Devosia ginsengisoli: FPZ08_16350
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Entry
FPZ08_16350 CDS
T06120
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
dea
Devosia ginsengisoli
Pathway
dea03030
DNA replication
dea03430
Mismatch repair
dea03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dea00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FPZ08_16350 (dnaQ)
03430 Mismatch repair
FPZ08_16350 (dnaQ)
03440 Homologous recombination
FPZ08_16350 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dea03032
]
FPZ08_16350 (dnaQ)
03400 DNA repair and recombination proteins [BR:
dea03400
]
FPZ08_16350 (dnaQ)
Enzymes [BR:
dea01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FPZ08_16350 (dnaQ)
DNA replication proteins [BR:
dea03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FPZ08_16350 (dnaQ)
DNA repair and recombination proteins [BR:
dea03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FPZ08_16350 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
QDZ12176
UniProt:
A0A5B8LVQ5
LinkDB
All DBs
Position
3342339..3343055
Genome browser
AA seq
238 aa
AA seq
DB search
MNREIVLDTETTGLSPAMGDRLVEIGCVELINHIPSGRHYHVYINPQRAMPEEAFRVHGL
SDEFLADKPLFGAVAQEFRDFLGDARLVIHNAPFDMGFLNAELERAGQRPLGNDVLDTVM
LAREKHPGARVSLDALCKHYGIDNSRRTLHGALLDSEILAEVYLELIGGKQVSLALVAES
RVSGADAIATRAIALPRPVALPPRITEGEIVAHDKLVATLGAESIWARYAPENGVAAE
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
ttgaatcgtgagattgtgctcgataccgaaaccaccggcctgtcgcccgccatgggcgat
cggctggtcgaaatcggctgcgtcgagctgattaaccacattccatccggccggcactac
cacgtctatatcaacccgcagcgcgccatgccggaagaagccttccgcgtgcatgggctg
agcgacgaattcctggccgacaagccgctcttcggggcggtggcgcaggaattccgcgat
ttcctcggcgatgcgcggctggtcatccacaatgcgcccttcgatatgggttttctcaat
gccgagctggaacgcgccggccagcgtccactgggcaatgacgtgctcgatacggttatg
ctggcgcgcgaaaagcatccgggcgccagggtgagccttgatgcgctgtgcaagcattat
ggcatcgacaattcccgccgcaccctgcatggcgctttgctcgacagcgaaatcctggcc
gaagtctatctcgagctgatcggcggcaagcaggtgagcctggctctggtcgccgaaagc
cgtgtttcaggcgccgacgccatcgccacccgcgccattgccctgccccggccggtggcc
ctgccgccgcgcatcaccgaaggcgaaatcgtcgcccatgacaagctggtggccacattg
ggcgccgaatccatctgggcccgctacgcgccggaaaacggcgtcgccgcggaatga
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