Devosia ginsengisoli: FPZ08_18440
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Entry
FPZ08_18440 CDS
T06120
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
dea
Devosia ginsengisoli
Pathway
dea03030
DNA replication
dea03410
Base excision repair
dea03420
Nucleotide excision repair
dea03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dea00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FPZ08_18440 (polA)
03410 Base excision repair
FPZ08_18440 (polA)
03420 Nucleotide excision repair
FPZ08_18440 (polA)
03440 Homologous recombination
FPZ08_18440 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dea03032
]
FPZ08_18440 (polA)
03400 DNA repair and recombination proteins [BR:
dea03400
]
FPZ08_18440 (polA)
Enzymes [BR:
dea01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FPZ08_18440 (polA)
DNA replication proteins [BR:
dea03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
FPZ08_18440 (polA)
DNA repair and recombination proteins [BR:
dea03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
FPZ08_18440 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FPZ08_18440 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
NYN_YacP
HHH_5
Motif
Other DBs
NCBI-ProteinID:
QDZ12551
UniProt:
A0A5B8LXL7
LinkDB
All DBs
Position
complement(3763892..3766807)
Genome browser
AA seq
971 aa
AA seq
DB search
MHLLLVDGSGYIFRAFHALPPLNRKSDGLPVGSVQGFCNMLWKLMEDLKGEDEPTHMAVI
FDHSGKTFRDDFYAEYKAQRPPAPPELVPQFPLTRAATRAYNIPSIEMEGWEADDIIATY
ACQARDAGGKVTIVSSDKDLMQLVEPDGSIRLLDTIPRPGQPPLRWIGVEEVFNKFGVSP
DKVIDVQALCGDSVDNVPGVPGIGVKTAAELINTYGDLETLLERAGEIKQNARREKLIAN
AELARISKRLVTLEQKVPVEIDLDGLARQPIEPGKLFPFLKAMEFLTITKRLGGLIGADP
DAWEADPELAAVPASPIGFNNEARSEARAARQEAEGRAGSPVVLHAAAMHEATRAIPWNK
EAYEIIRDADHLQRWIDAAYKEGLVAVDAESTGLDNQTADLVGLSFATQPGNGAYLPLGH
STGEGDIFGGGHAEGQMDIRQALDMLRPLLADKAILKIFHNAKYDLGLLARYDVTVNSLD
DTLLLSYSLDGPQFNTMSELADHWLGVPGQSIKDLIGSGKSQITFAQVPIDKAALYAAED
SDMTLRLWRILKPRLAAEGMTTLYETIERPLAPVLARMEGRGISVDRQILARLSGDFAQR
AAALEAEAYELAGSNFNLGSPKQLGEILFDRMGLEGGTKTKTGAWSTGADVLEDLAAKGI
PLARTIVDWRQLTKLMGTYTNALPEYMNQRTGRVHTTYSQHSVLTGRLSSNDPNLQNIPV
RTEDGRKIRTAFVAAPGKLLISADYSQIELRVLAHIADIQALKDAFEEGLDIHAMTASEM
FGVPVEGMPSDVRRRAKAINFGIIYGISAFGLANQLGIERSVAGDYIKTYFERFPGIKDY
MDAQRRRVKADGYVSTIFGRKINFPNANSSHAAERSFVERASINAPIQGSAADIIRRAMI
RMEPELKQAGIEADMLLQVHDELIFEVPEGTEEVAMPVIKKVMEGAAEPAVRLTVPIQVD
AHAARDWDGAH
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atgcatctgctgcttgtcgatggttcgggttatatcttccgcgcctttcacgctttgccc
ccgctcaatcgcaagtccgacgggctgccggtgggctccgtgcagggcttctgcaacatg
ctgtggaagctgatggaagatttgaagggcgaggacgagccgacccacatggccgtcatc
ttcgaccattccggcaagaccttccgtgacgatttctatgccgaatacaaagcccagcgg
cccccggcgccgcccgagctggtgccgcaattcccgctgacccgcgccgccacccgcgcc
tataacattccctccatcgagatggagggctgggaggccgatgacatcatcgctacctat
gcctgccaggcgcgcgatgccggcggcaaggtgaccatcgtgtcctccgacaaggacctg
atgcagctggtcgagcccgatggctccattcgcctgctcgataccattccccgccccggc
cagccgcccctccgctggatcggcgtcgaggaagtgttcaacaagttcggcgtttcgccc
gacaaggtcatcgacgtccaggctttgtgcggcgacagcgtcgacaatgtccccggcgtg
ccgggcatcggcgtcaagaccgccgccgagctgatcaatacctatggcgatctcgaaacc
ctgctcgagcgcgccggcgagatcaagcagaatgcccgccgcgaaaagctcatcgccaat
gccgagctggcccgcatttccaagcgcctcgtgacgctggagcagaaggtcccggtcgag
atcgacctcgatggccttgcccgccagcccatcgagccgggcaaactgtttcccttcctc
aaggcgatggaatttctcaccatcaccaagcgcctgggcgggctgatcggcgccgatccc
gacgcctgggaggccgatccggaactggccgccgtgcccgcttcgccaatcggcttcaac
aacgaggcccgctccgaagcccgcgctgccaggcaggaggccgagggccgcgccggctcg
cccgtcgtgctgcatgccgccgccatgcatgaggcgacccgcgccatcccctggaacaag
gaggcctacgagatcatccgcgatgccgaccacctgcagcgctggatcgacgccgcctac
aaggaaggtctcgtcgccgtcgatgccgaaagcaccggcctcgacaatcagaccgccgat
ctcgtcggcctctccttcgctacgcagcccggcaatggcgcctatctgccgctgggccac
agcactggcgaaggcgacatattcggcggtggccacgccgaaggccagatggatattcgc
caggcgctcgacatgctgcggccgctgctggccgacaaggcgatcctcaagatcttccac
aatgccaaatacgacctgggcctgctggcccgctacgacgtcacggtcaacagcctcgat
gacacgctgctgctgagctattcgctcgatggcccgcaattcaacaccatgagcgaactg
gccgatcactggctgggcgtgcccggccagtcgatcaaggacctgatcggctcgggcaag
agccagatcaccttcgcccaggtaccgatcgacaaggccgcgctctatgccgccgaagac
agcgacatgacgctccgcctctggcgcatcctcaagccccgcctcgccgccgagggcatg
accacgctttacgaaaccatcgagcggcccctggccccggtccttgcccgcatggaaggc
cgcggcatttctgtcgatcggcagattctcgcccgcctctcgggcgatttcgcgcagcgc
gccgccgccctcgaggccgaggcctatgaactggccggcagcaatttcaacctcggctcg
cccaagcagctcggcgaaatcctcttcgaccgcatggggctcgagggcggcaccaagacc
aagaccggcgcctggtccaccggcgccgatgtgctggaagacctcgcggccaagggcatt
ccgctggcccgcaccattgtcgactggcgccagctcaccaagctgatgggcacctatacc
aatgccctgcccgaatacatgaaccagcgcaccggccgcgtgcacaccacctatagccag
cactcggtgctgaccgggcgcctctcgtccaacgatcccaacctgcagaatatccccgtc
cgcaccgaagacggccgcaagatccgcaccgccttcgtcgccgcgccgggcaagctgctg
atctcggccgactacagccagatcgagctgcgcgtcctcgcccatatcgccgatatccag
gccctcaaggacgccttcgaggaaggcctcgacattcacgccatgacggcatcggaaatg
ttcggcgtcccggtcgaaggcatgccgtcggacgtgcgccgccgcgccaaggccatcaat
ttcggcatcatctacggcatttcggcctttggcctggccaaccagctcggcatcgagcgc
tcggtggccggcgactacatcaagacctatttcgagcgcttccccggcatcaaggactat
atggacgcccagcgccgccgcgtgaaagccgacggctatgtctcgaccattttcggccgc
aagatcaatttccccaacgccaattccagccacgccgccgaacggagctttgtcgaacgc
gcctccatcaacgcccccatccagggctccgccgccgacatcatccgccgcgccatgatc
cgcatggagccggaactgaaacaggccggcatcgaagccgacatgctcttgcaggtgcat
gacgaactgatcttcgaagtgccggagggtacggaagaagtggccatgccggtcatcaag
aaggtgatggagggggcggcggaaccggcggtgcggctaaccgtgcccatccaggttgat
gcgcatgcggcacgggactgggacggggcgcattga
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