Devosia ginsengisoli: FPZ08_21050
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Entry
FPZ08_21050 CDS
T06120
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
dea
Devosia ginsengisoli
Brite
KEGG Orthology (KO) [BR:
dea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dea03016
]
FPZ08_21050 (truA)
Enzymes [BR:
dea01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
FPZ08_21050 (truA)
Transfer RNA biogenesis [BR:
dea03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
FPZ08_21050 (truA)
Prokaryotic type
FPZ08_21050 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
AAA_25
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
QDZ13004
UniProt:
A0A5B8LZ71
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All DBs
Position
4319854..4320597
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AA seq
247 aa
AA seq
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MSAHRYKLTIEYDGTPFSGWQRQADRPSVQQALEQAIYGMSGETVTTQAAGRTDAGVHAL
GQVAHFDLGKTWDPFRIREALNYHLRPDPVAIIAAEAVGDDFEARFSARARHYEYRILNR
RAPAVIERDHVWHVPMELDADAMDHAAGLILGTHDFTTFRSSECQANSPLRTLDKFSVRR
ELDHIVISASARSFLHHQVRSMVGSLKLVGEGKWSPSDFRAALDARDRRRCGAMAPSSGL
YLTRVDY
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atttctgcccacaggtataagctcactatcgaatatgacggaacgcctttctcgggctgg
cagcgccaggccgaccggcccagcgtgcagcaggcgctggagcaggccatttacgggatg
tcgggcgagacggtgacgacccaggcggcggggcgcaccgatgcgggcgtgcatgcgctg
gggcaggtggcccatttcgacctgggcaagacctgggacccgttccgtatccgcgaggcg
ctgaattatcacctgcgacccgaccccgtggcgatcattgcggccgaggcggtgggcgat
gatttcgaggctaggttctcggccagggcgcggcattacgaatatcgcatcctcaaccgc
cgcgcgcctgctgtcatcgagcgcgatcatgtctggcacgtgcccatggagctggatgcc
gatgccatggatcatgcagccggcctgatcctgggtactcatgacttcaccacgttccgc
tcatcggagtgtcaggctaactcgcctttgcggaccttggataagttttcggtgcggcgg
gagctggaccatatcgtgatatcggccagtgcccgcagcttcctgcatcaccaggtgcgc
tccatggtgggctcgctcaagctggtgggcgagggcaagtggtcgccatcagatttccgc
gccgcgcttgacgccagggaccggcgtcgctgcggagccatggccccgtcatcggggctc
tacctgaccagggtcgattactag
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