Dehalococcoides mccartyi BAV1: DehaBAV1_0052
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Entry
DehaBAV1_0052 CDS
T00518
Name
(GenBank) DNA replication and repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
deb
Dehalococcoides mccartyi BAV1
Brite
KEGG Orthology (KO) [BR:
deb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
deb03400
]
DehaBAV1_0052
DNA repair and recombination proteins [BR:
deb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
DehaBAV1_0052
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
Lon_C
AAA_16
nSTAND_NTPase5
AAA
AAA_22
ABC_tran
NTPase_1
Zn_Ribbon_YjdM
RecA_N
nSTAND3
AAA_30
DUF7125
DAP3
NACHT
Isochorismatase
Rad51
AAA_5
NPHP3_N
AAA_14
SLFN-g3_helicase
GvpD_P-loop
ATPase_2
Zeta_toxin
TackOD1
Motif
Other DBs
NCBI-ProteinID:
ABQ16644
LinkDB
All DBs
Position
53418..54812
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AA seq
464 aa
AA seq
DB search
MDKSRNVYICSNCGHESLKWLGRCPGCQEWNTLEETTIAAPLGRKNAPARVISPAAELSS
LNASDTTRRSLSISEFNRVLGGGIVPGSLMLLGGEPGIGKSTLLLQVAASVAQSGGKVVY
VSGEENPAQIKMRAQRLGISGEGLFLMAETDLNAILAQLSVLCPSLVVIDSIQTVFLPEL
EAAPGAINQVRESALRLMQWAKSSGASVFITAHVTKEGNIAGPRILEHIVDVVMYFEGES
QSAYRLIRSVKNRFGSTNEVGIFEMKSEGLVEVANPSQIFLSNRQANTVGSAVTAVLEGS
RPLLVEVQALTNTTSFGQPRRTANGVDFNRTIMIAAVLSKRLSMRLGTQDIIVNATGGIR
LDEPAADLAIALAIASSYRDIGVCPETIALGEIGLSGELRTIPHLERRLSEASRLGFTRA
LVPAGANCQNININGIQIIAVSTVKEAIKLALTGVKTETEDVFE
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atggataaaagccgtaatgtttatatctgttccaactgcggacatgagagcctgaagtgg
ctggggcgttgccccggctgtcaggaatggaatactcttgaagaaacaacaattgctgca
cctctcgggcgtaaaaatgcacctgcccgggttatcagcccggcagccgagctttccagt
ctgaatgcatcagatactacccgccggagtctatctatttcagagttcaaccgggttttg
ggcggtggaatagtaccgggttcactgatgcttttaggtggtgaaccgggtatcggcaaa
tccacgctccttcttcaggtggctgcctcggtagcccagagcggcggcaaagtggtatat
gtttccggggaagagaaccccgcccagataaaaatgcgcgctcagcgtctgggtatcagc
ggcgaggggcttttccttatggctgagacagaccttaatgccattctagcccagctttca
gtcctctgcccgtcattggttgttatagactctatccagactgtattcttgcctgagctt
gaggccgcacccggtgctataaatcaggtgcgtgaatcagccctccgcctgatgcagtgg
gctaagagcagcggtgccagcgtatttatcaccgcccatgttaccaaagagggcaacatc
gccgggccgcgcatactggaacacatagtagatgtggtcatgtactttgagggcgagtcc
cagagtgcttaccgtttgatacgttcggtcaaaaaccgcttcggttctaccaacgaagta
ggcatatttgaaatgaaaagtgaaggattggtggaagtagccaatccctcgcagatattt
ttatctaatcggcaggcaaacactgttggttcagctgtaacagcagtgctggagggtagc
cgccctttactggtagaggtgcaggcactcaccaataccaccagtttcggccagccgcgc
cgcacggccaacggggtagattttaaccgtactattatgatagccgctgttctttccaaa
cgcctttccatgcggctgggtacccaggacataatagtaaatgccaccggcggtattcgt
ctggacgagccggccgcagatttggctattgctttggccattgcctccagttaccgtgat
atcggggtctgcccggaaaccatagcactgggtgagattggcctttcaggggaactgagg
acaatccctcatttggaaagacgtctttccgaggccagccgtttgggttttacgagggct
ttggtacctgccggtgctaattgccagaatataaatataaatggtatccagattattgcg
gtttcaactgtcaaagaggctattaaactggcgcttaccggggtaaaaacggagaccgaa
gatgtttttgaatga
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