Dehalococcoides mccartyi BAV1: DehaBAV1_0525
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Entry
DehaBAV1_0525 CDS
T00518
Name
(GenBank) SMC domain protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
deb
Dehalococcoides mccartyi BAV1
Brite
KEGG Orthology (KO) [BR:
deb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
deb03400
]
DehaBAV1_0525
DNA repair and recombination proteins [BR:
deb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DehaBAV1_0525
Archaeal homologous recombinant proteins
DehaBAV1_0525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
AAA_29
SbcC_Walker_B
AAA_21
Rad50_zn_hook
TMF_TATA_bd
NPV_P10
ABC_tran
DUF4320
RsgA_GTPase
PKcGMP_CC
Motif
Other DBs
NCBI-ProteinID:
ABQ17110
LinkDB
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Position
complement(511251..513830)
Genome browser
AA seq
859 aa
AA seq
DB search
MIPVKLKIKNFMCYRGEIPPFSFNGIHTACICGQNGAGKSALIDAITWALWGKSRAKSDD
DVISLNEQEAEVSLDFEISGELYQVIRQRQRPKKAGTNGQSLLSLFSLQDEKPRNITGDT
LTQTEKKIISILHMDYDTFINSAFLRQGHANQFTQQPPGKRKEVLANILGLEIYDQLEDL
ARQAVREAETKNLQIEQSIEDGKESLKSRPELEEALNHTRQDLAEGEGKLKIQLAELEIM
RHKKHSFDTKQNTCRQLDNDLKDISKDQSRWIQTLQEIKQRISTFETLSAQKEAIFKGFQ
EYSVCQSLYDKHNRILAKLRQLENTKKPLEDAVYKEENNLKNTLGKYQERLKFRQDTAQT
LVILEKEKTQSDQLKTRLETEEAELKIQQNKLLNLQSSLARLETEHAVAVKEVNALEEKL
NLLAEAGENRCNCPLCETELGQDKLKLVFGKYKTEQDTQKTLQADLQEKLSQMQSDIQAL
LKYIETETNRLSHSHKQYERQISLLDKGIAEAKEAEIKAAEGRNLIAGIEKQLNERSYAA
AEQASLAVVEKEIQGLNFDNAEYTRNQQNLADLTPFEEKKRKLDEAINRLPLENDSLKKA
SSALAELTARRDNKLNEQQTLLKELAELPVLEKELGEAETEYKSLSQRQDALRQQLGSLS
QKAEQINELEKKLKKQAQEKDQTTQEINYFGKLVRAFGKKDGIQTMLIEDTLPELENGAD
LLLSRMTDGRMHLSIETQRSTKKGDQTETLDINISDELGTRNYETFSGGEAFRIDFAIRI
ALSHLLANRLGAPLRTLIIDEGFGTQDTTGIERLKEAINSIQNEFDKILVITHIDDLKDS
FPTRIEIDKTPSGSAIRLN
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atgattcctgtcaaactcaaaataaaaaactttatgtgttaccggggcgaaataccgcct
ttttcttttaacgggatacatactgcctgtatctgcggtcaaaacggggcaggcaaatcc
gccctgatagatgccattacctgggcgctctggggaaaaagccgggctaagagtgacgat
gatgtgatttccctaaacgagcaggaagcagaagtcagccttgattttgaaatttcaggt
gaactttatcaggttatccgccagcgccaacgccccaaaaaggcagggacaaatggacaa
agcctgttaagccttttttcactccaagatgaaaaaccccggaatataaccggagacacc
ctgacccagactgagaaaaagataatctccatactccatatggactatgacacctttata
aacagcgcctttctgaggcagggacatgccaaccagtttacccagcaaccccccggcaaa
cgtaaagaagtgctggccaacatactggggttagaaatatatgaccagctggaagatttg
gccagacaggctgtacgtgaagcagaaaccaaaaacctgcagattgaacagagtattgaa
gatggcaaagaaagtctgaagtccagaccggaactggaagaagccctaaatcatacccgt
caagacctggccgaaggtgaaggcaaattaaaaattcagcttgccgagctggaaattatg
cggcacaagaaacatagctttgacaccaaacaaaatacctgccgccagttggataacgac
ctgaaggatatttccaaagaccaatcccgctggattcaaaccctgcaagaaataaaacag
cgtatcagcacttttgaaacactctctgcccaaaaggaagcaatctttaaaggttttcag
gaatactccgtctgccaaagcctgtatgataaacacaaccggatattggctaaactaagg
caattggaaaataccaaaaagccccttgaagatgccgtttacaaagaagaaaacaatctt
aaaaataccttggggaaatatcaggaacgcctgaaattcaggcaagacactgctcaaact
ctggtgatactggaaaaagaaaaaacccaatcagaccaactgaaaacccggttggaaact
gaagaggcggaactgaaaatccaacagaacaagctgcttaatctgcaaagcagcttggcc
agactggaaactgaacacgccgttgccgtcaaagaggtaaacgcacttgaagaaaaactg
aacctgctggctgaagcgggtgaaaaccgctgtaactgccctctatgcgaaactgaactg
ggacaagacaagctcaagctggtgtttggcaaatacaagacggaacaggatacccaaaaa
accctgcaagcagatctgcaggaaaaactgagccagatgcaatcagatatacaagccttg
cttaagtacattgaaaccgaaactaaccgcctgagtcatagccacaaacagtatgaaaga
cagataagtctactggacaaagggattgcggaggctaaagaggctgaaataaaggcggcg
gaaggcagaaacctgattgcaggtattgagaaacaactgaacgaacggagctatgccgct
gcggagcaggccagtctggcagtagtcgaaaaagaaatacagggactaaattttgataat
gccgaatatacccgaaaccagcagaatctggctgatttgaccccttttgaagaaaagaaa
cgtaaacttgacgaagcaattaaccgcctgccgctggaaaatgacagtctaaaaaaggca
tcctctgcactggcagagctgacagcccggcgtgataataaactaaatgaacagcagacc
ctgcttaaagagctggcggaattaccggtgcttgaaaaagaactgggagaagccgaaact
gaatataagtcactcagtcaaaggcaggatgccctgaggcaacaactgggttcactcagc
cagaaagcagaacagataaatgagctggagaaaaagctgaaaaagcaagcacaggagaaa
gaccaaactacccaagaaataaattatttcggtaaactggtcagagctttcggcaaaaaa
gacggaatccagactatgcttattgaagacaccctgcctgaactggaaaacggagctgac
ctgttgctgtcgcgtatgactgacggccgcatgcaccttagcatagaaacccagcgttcc
accaaaaagggagaccaaaccgaaactctggatataaatatctcggatgaacttggcacc
cgcaactatgaaacctttagcggcggtgaggctttcaggatagattttgcgatcaggatt
gccctgtcacacttgctggcaaaccgtctgggcgcacctttgcggacacttatcattgat
gagggatttggcacacaggacactaccggcattgagcgccttaaagaggccataaactct
attcagaacgagtttgacaagatactggtcataacccatatagatgacctgaaagattca
ttccccacccgcattgagatagacaaaaccccatccggctcagctatccgcctaaactaa
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