Dehalococcoides mccartyi BAV1: DehaBAV1_0861
Help
Entry
DehaBAV1_0861 CDS
T00518
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
deb
Dehalococcoides mccartyi BAV1
Pathway
deb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
deb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DehaBAV1_0861
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
deb03019
]
DehaBAV1_0861
03016 Transfer RNA biogenesis [BR:
deb03016
]
DehaBAV1_0861
Enzymes [BR:
deb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
DehaBAV1_0861
Messenger RNA biogenesis [BR:
deb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
DehaBAV1_0861
Transfer RNA biogenesis [BR:
deb03016
]
Prokaryotic type
tRNA degradation factors
DehaBAV1_0861
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
KhpA-B_KH
KH_2
CsrA
Motif
Other DBs
NCBI-ProteinID:
ABQ17443
UniProt:
A5FQT2
LinkDB
All DBs
Position
850798..852960
Genome browser
AA seq
720 aa
AA seq
DB search
MITANSFERTIGGRKLVIESGKLARLADAAITIRYADTELLVTLCSAKKPREGVDFLPLT
IDYEERMYAAGKIPGGFIRREGRPSEQAILAGRLTDRPLRPLLPKEWRNDLQIIITVIAS
DKENDADIWGVVGASTVLAMSEIPYEGPVGASRIGYINGEFVLNPTFAQLESSQLDLVVV
STRKAVVMIEAGSKEIPEDIMINAIEFAHKANQELIDLQDEIRAKLGKEKLPVPVLEIPE
EVKTAVAAFVKGRVNEALSHQDKTARENAVEGLQAELVAALSETFAEGDILAAYDKEIKK
AIRSTILEKDIRVNGRGIKQLRQLDAETGLLPRVHGSALFTRGDTQVMAITTLGSLQESQ
QLDGLSAEDTKRFMLHYNFAPFSTGEVKRSGSPGRREIGHGALAERALVPILPTPEEFPY
TIRLVADVVGSSGSTSMGSVCSSSLSLMDAGVPVKKAVAGISIGLITGENGTYCTITDIE
GIEDNYGDMDFKVAGTRDGITAIQVDMKVKGISFDIIRDAIYQAKEARYNILDVMDKALA
QPKTELSPYAPRMYKINIDPSKIGSVIGSGGKTIRSIIEQTNTTVDIENDGTVVIGAIDE
ASAKKAIKIIEDLTKDIEAGSIYTGKVTRIMTFGAFVEILPGKEGMVHISELADHRVEKV
EDIVKVGDDITVKVIEIDNQGRVNLSHRVILNPNAVPISRNRDSQPRRPGPFRPSDRSNS
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
ttgataactgccaactcatttgaacgaactatcggcggcaggaaacttgttattgagagt
gggaaacttgcccgtcttgcagatgccgcgattactatccgctatgcggatactgaatta
ctggtaacactttgttctgccaagaaacctcgcgaaggggtagattttctccccctgact
atagattacgaagagcggatgtatgccgccggcaaaatccccggcgggtttatccgccgt
gaaggccgccccagtgaacaggctattttggctgggcgactgactgacagacctcttcgc
cctcttctccccaaagagtggcgcaatgatcttcagattattattaccgtaattgcttca
gacaaggaaaacgacgctgatatctggggcgtagtgggtgcttccacagttctggccatg
tctgaaataccatatgaaggtccggtcggagccagccgtattggatatataaacggtgaa
tttgtgcttaatcccacttttgcccagttggaatcaagccagctggatctggtggtagtc
agcacccgcaaagcggtggtgatgattgaagccggttccaaagaaattcctgaagacatt
atgattaacgctattgagtttgcccataaggcaaatcaagagcttattgacctccaggat
gaaatccgtgccaagctcggcaaagaaaagctacccgtgccggtgcttgaaatacccgaa
gaagtcaaaacggctgttgccgcttttgtaaaaggacgggtaaatgaagcccttagccac
caagataaaaccgcccgtgaaaatgcggttgaaggccttcaggctgaactggttgcggct
ttatcagaaacattcgccgaaggtgatatcctggccgcttatgacaaagaaatcaagaaa
gctatccgctctactatacttgagaaggatatccgggtaaacggacggggtatcaaacag
cttcgccagctggatgctgaaacagggcttttgccccgcgtccatggctctgctttattc
acccgcggtgatacccaggtcatggctataaccacccttggttctttacaggaatcccaa
cagctggatggcttaagtgccgaagataccaagcgttttatgcttcactacaactttgcc
cccttctctaccggtgaagtaaaacgttccggttctcccggacggcgtgaaatcggtcat
ggcgctttggccgaacgtgccttagtgcctatcctgcccactccggaagaattcccctat
accattcgtctggtagctgacgtggttggctcatcaggctctacctctatgggcagtgtc
tgttcgtccagcctgtcacttatggatgcaggcgtaccggtcaaaaaagctgtcgcaggt
atctccatcggccttattaccggtgaaaatggtacctactgcaccattactgatattgaa
ggcatcgaagataactatggcgatatggactttaaagttgccggtacccgtgacggcata
accgccatacaggtggatatgaaggtcaagggtatcagttttgatattatccgtgatgcc
atataccaggcaaaagaagcccgctataacatactggatgtaatggacaaagctcttgcc
cagcctaaaacagagcttagcccttatgcccccagaatgtacaagataaatattgacccc
tccaagattggcagtgttatcggcagcggcggcaaaactatccgctctattattgagcaa
accaatactaccgttgacattgaaaatgacggcacagtggttattggtgctattgacgag
gcttcggctaaaaaggccatcaagataattgaagacctgactaaagacatcgaagccggc
agtatttataccggtaaggtcacccgtataatgaccttcggtgcttttgttgaaatcctg
cccggaaaagaaggcatggtacacataagcgaactggccgaccatagagttgaaaaagtg
gaagatatagtcaaggtgggtgatgatataacggttaaggttatagagattgataaccag
ggcagggtaaacctgtcacacagggttattctcaacccgaacgctgtacccatttcacgc
aatcgtgattctcagccgcgtcgtcccggtcctttccgcccttctgaccggtctaactca
taa
DBGET
integrated database retrieval system
