Dehalococcoides mccartyi BAV1: DehaBAV1_0872
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Entry
DehaBAV1_0872 CDS
T00518
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
deb
Dehalococcoides mccartyi BAV1
Brite
KEGG Orthology (KO) [BR:
deb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
deb03016
]
DehaBAV1_0872
Enzymes [BR:
deb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
DehaBAV1_0872
Transfer RNA biogenesis [BR:
deb03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
DehaBAV1_0872
Prokaryotic type
DehaBAV1_0872
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
ABQ17454
UniProt:
A5FQR4
LinkDB
All DBs
Position
complement(861739..862641)
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AA seq
300 aa
AA seq
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MDGILNINKPFGITSFDVVAKVRRIYSQKRVGHGGTLDPYATGVIPVFLGKSTRLIEYLS
SVSKTYLAEIELGVETDSYDSEGEITFRKTCDYVTREMIYKTLMDFQGEIIQIPPMYSAV
KHRGMRLYNLARQGIEVERIPRVATIYGIELLNYTSPVLRVRIECGHGTYIRSLAFDLGR
KLGCGAYLKSLVREAYGQFNLTNSLDFADLEAAKCDGKLAGILLPLETAIGHLPRVSLDE
ENITRLVNGLEITLDRIDKPEAVAVYNAENSFVAIIQPETDGTWHPAKVFIRQSPKPDAN
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atggacggcatcctgaatatcaacaaacctttcgggataacctcgtttgatgtagttgca
aaagtcaggcgtatttattcccaaaaaagggtagggcatgggggtactcttgacccgtat
gcaaccggagtaattccggtgtttttgggaaaatctacccgtcttatagagtatctgtct
tccgtcagcaagacatatctggctgaaatagagctgggagtggagacggatagctatgac
agcgaaggcgaaatcactttccgcaaaacctgtgactatgttacccgtgaaatgatatat
aaaactttgatggattttcagggtgagataatccaaattccccctatgtatagtgccgta
aaacaccgcgggatgcgtctttacaatctggcaaggcaagggatagaggttgaaagaatt
ccccgggtagccacaatttatggcattgaactgcttaactacacttcaccggtactgcgt
gtacggatagaatgcggacacggcacatatattcgttctctggcctttgacttgggtaga
aaactgggttgcggggcgtatctgaaatctctggtaagagaggcatatggtcagtttaat
ctgacaaactctctggattttgctgaccttgaggccgcaaaatgtgacgggaaactggca
ggtattctcctcccgctggagacagccatagggcatctgccaagagtttcccttgatgaa
gagaatataacccgcttggtaaatggtctggagataacactggataggattgacaaacct
gaggctgtggccgtatacaatgctgaaaacagtttcgttgctataatccagccggagact
gacggtacttggcatccggctaaagtcttcataagacaaagcccgaaaccggatgcaaat
tag
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