Dehalococcoides mccartyi BAV1: DehaBAV1_1354
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Entry
DehaBAV1_1354 CDS
T00518
Name
(GenBank) metal dependent phosphohydrolase
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
deb
Dehalococcoides mccartyi BAV1
Pathway
deb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
deb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DehaBAV1_1354
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
deb03019
]
DehaBAV1_1354
Messenger RNA biogenesis [BR:
deb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
DehaBAV1_1354
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
KH_2
LapA_dom
fvmYukDl_N
BTBD16_C
DUF4407
Motif
Other DBs
NCBI-ProteinID:
ABQ17931
UniProt:
A5FPE4
LinkDB
All DBs
Position
1312921..1314504
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AA seq
527 aa
AA seq
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MFEFFMETAPATTTGLPLSAILAIFFSFIIGIVFGGMALFVFRGFIMNRQLRIAQRKATK
MLADSKLEAKDVLVEAKREADKTRNSAETELKERRSELAKQENRVIQKTEALDRKLENLE
QREQSLTNREKSIDETQSQIEEIRENELKRLEEVANMTTEQAKTSLLEMLEGEMQQETSR
RLREWEIKIKAEADEKAREVVSQAIQRCASDVVTETTTNVVPLPSDEMKGRLIGREGRNI
RALEQATGVDLIIDDTPEAVTISSFDPVRREVARQALSKLIIDGRIHPARIEEVVTKAKE
EVEAAMIASGEQAAYQAGVHGLRPEIIKVMGRLKYRTSYGQNVLQHSIEVAQMSGMIGSE
LGVNVTLARRAGFLHDIGKAVDRDVEGTHTQIGADMVKQWEKSPEVIKGVAEHHFDTPTV
SIWGFIVSAADAISSARPGARRESLENYIKRLKALEEIADSFKGVEKSFAIQAGREVRIM
VKPDEIDDLGAMRLARDIVKRIEDGLEYPGQIKVTVIRETRSVDFAK
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgttcgagttttttatggagacagcgccggctaccaccaccggtttgcctttgtctgct
attctggctatctttttcagttttattataggtatagtgttcggcggtatggcactattc
gtattcaggggcttcattatgaaccgccagcttcgtattgcccagcgtaaagctaccaaa
atgctggctgattccaaactggaagctaaggatgtgctggtggaagccaagcgcgaggct
gacaagactcgcaattccgccgaaactgaacttaaggaacgccgttctgaactggccaaa
caggaaaacagggttatccaaaaaacagaggcgctggaccgcaagctggaaaaccttgaa
cagcgtgaacagtctttaaccaaccgggaaaaaagcattgacgaaacccaatctcaaatt
gaagaaatacgcgaaaacgaactaaaacgcctggaagaagtggccaacatgaccactgaa
caggccaaaacgagcctgcttgaaatgctggaaggcgaaatgcaacaggaaacctcccgc
cgcctgcgtgagtgggagataaaaataaaagccgaagcggatgaaaaagcccgcgaggtt
gtttcccaggctatccagcgttgtgcctctgacgtagttaccgaaaccaccactaatgtc
gtacctctgcccagtgacgaaatgaagggcaggctgattggccgcgaaggccgcaatata
cgggctttggaacaggcaaccggcgtagacctgataatagatgacaccccggaggcagtt
actatttccagttttgacccggtgcggcgtgaagttgcccgtcaggcactttcaaaactt
atcattgacgggcgtattcaccctgcccgcatagaagaagtggtaaccaaggccaaagag
gaagttgaagccgctatgatagcttccggtgaacaggctgcctaccaggcaggcgttcac
ggactgcgacccgaaataatcaaagtaatgggacggctgaaataccgcaccagttacggc
cagaatgtacttcagcacagcatagaagtagcccagatgtccggcatgataggcagtgag
ctgggtgtaaatgttacccttgcccgccgggccggctttctgcatgatataggcaaagcg
gttgaccgagacgtggaaggcacccatacccagataggcgcagacatggttaaacagtgg
gaaaaatctcccgaagttattaaaggtgtggcggaacatcactttgacacccccaccgtt
tccatctggggctttatagtatctgctgcagatgccatttcttcggccagacccggtgcc
cgccgcgaatcactggaaaactacatcaaacgtctgaaggctcttgaagagattgccgac
agcttcaaaggggttgaaaaatcctttgctatccaggcaggacgtgaagtgcggataatg
gtaaaacctgatgagattgatgatctgggagctatgcggctggccagagatatcgtcaag
aggattgaagatggtctggaataccccggacagattaaagttaccgttatacgggaaacc
agatccgtagactttgccaagtaa
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