Dehalobacter sp. CF: DCF50_p1421
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Entry
DCF50_p1421 CDS
T02279
Name
(GenBank) ATP-dependent DNA helicase UvrD/PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
dec
Dehalobacter sp. CF
Pathway
dec03420
Nucleotide excision repair
dec03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dec00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DCF50_p1421
03430 Mismatch repair
DCF50_p1421
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dec03400
]
DCF50_p1421
Enzymes [BR:
dec01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DCF50_p1421
DNA repair and recombination proteins [BR:
dec03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DCF50_p1421
MMR (mismatch excision repair)
Other MMR factors
DCF50_p1421
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_12
AAA_22
ResIII
DUF6630
Terminase_6N
Motif
Other DBs
NCBI-ProteinID:
AFV05427
LinkDB
All DBs
Position
complement(1458080..1460353)
Genome browser
AA seq
757 aa
AA seq
DB search
MYYLKDLNPVQREAVESGDGPLLILAGAGSGKTRVLTYRIAHLVAKGVNPWNILAITFTN
KAAKEMRDRVLALVGSEGEGLWVATFHSTCVRILRREINALPGYSRSFVIYDAGDQLTVL
KECLKELNLDDKKFAPRAVLATISDAKNKLLGPDAFAAEARDFFTEKAAAAYRLYQRKLY
SNNALDFDDIIMLTVRIFREDPDVLSYYQEKFRYILVDEYQDTNHAQYILIKQLAARYRN
LCVVGDDDQSVYGWRGADIQNILDFERDYPEAKVLKLEQNYRSTQKILRAANEVVSNNYN
RKGKSLWTENTEGEEIVLFKATDEHDEARFVTGKIRDLADTEGRRYNDFAILYRTNAQSR
VLEEHFMKESIPYKIYSGVKFYERLEIKDILAYLRLLNNPADRVSFARVINVPKRGIGKV
SLDKILEYAEEQGMPVLDALAEVAYIPGLQTKGVGTLTNFHELMLGFRQEAQKGVPLTEL
TEKIIRDTGYMASLRAENTVEAESRIENLNEFLSVTAEYDNNLQDYLEDPDLETDQNMLI
LGGFLEQVSLVAEIDSFDEAEDAVKLMTMHSAKGLEFPVVFAVGMEDGIFPSSRSLLEQV
LLEEERRLCYVTITRAREKLFLSTTEQRMVYGHIQSSVPSRFLKEIPEELLTEEASRREI
LGRGFGLSSQTRKYAGGDAASTASNSFAGRKSWKDSGASVVSSDPGSFLVGDKVGHPKFG
HGIVMSVKGEGNSAEITVVFSGEVKKLIAEYARLSKI
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atgtattatcttaaggacctgaaccctgtccaacgggaagcagttgaaagtggagacggt
cctcttcttattttagccggggccggttcaggcaagacaagagtattaacttacaggatc
gcgcatctggtggccaaaggcgttaatccctggaacatcctggcgattacgtttaccaat
aaggctgccaaggagatgagagaccgcgttcttgcgctggtaggcagtgagggtgagggg
ctctgggtagcgacctttcattctacctgcgtgcggatcttaaggcgggaaatcaatgcc
ctgccgggatattcccggagctttgtgatctacgatgccggggaccagctgacggtgctt
aaagagtgtctgaaggaactgaatcttgatgataaaaaatttgcgccgcgggctgtttta
gcgacgatcagcgatgccaagaataagcttttagggccggatgcttttgctgcggaggcc
agagatttctttaccgaaaaagcggccgcggcctaccgtctgtaccagagaaagctctat
agcaataatgccttagatttcgatgatatcatcatgctgacagtgagaatattcagggag
gacccggatgtcttaagctactatcaggaaaaattccgttacatcctcgtcgatgagtat
caggataccaatcatgctcagtatattctgatcaagcagcttgctgcacgctatcgcaac
ctttgcgtcgtcggggacgacgaccagtccgtttacggctggagaggtgcagatatccag
aatatcctggattttgaaagagactacccggaagccaaagtgttgaagctggaacagaat
taccgttcgacgcagaagattctgcgggcggccaacgaagtcgtcagcaataattataat
cgcaaagggaaatctctctggacagaaaatacggaaggagaggaaattgttctctttaaa
gcgacagatgagcatgacgaagcccgctttgtgactgggaaaatccgtgatctggctgat
acagaaggcagacggtataacgattttgcgatcctgtaccgcacgaatgcccagtcccgg
gtgctggaagaacacttcatgaaggaaagcataccctacaaaatatattccggggttaag
ttctatgaacgcctcgaaatcaaggatatcctggcctatttgcggctgctgaacaatcct
gccgaccgtgtcagcttcgccagggtcattaatgtgcccaaaagaggtattggaaaagtc
agcctggataaaatattggagtacgctgaggaacagggcatgccggttctggatgcgctg
gctgaagtggcatatattcccggtctccagaccaaaggcgttggcacactaacgaatttc
catgaactgatgcttggattccgtcaagaagctcaaaagggtgtgccgctgaccgagttg
acggagaagatcataagggatacaggatacatggcctctctccgagcggaaaatacggtg
gaggctgaatcccggatagaaaaccttaatgaattcctttccgtaacagccgagtacgac
aacaaccttcaggactaccttgaggatcctgatctggagactgaccagaatatgcttatt
ctgggaggattcctcgaacaggtttctctggtcgctgaaattgacagttttgatgaagcg
gaagacgccgtaaagttgatgaccatgcacagcgccaaaggattggaattcccagttgta
tttgcagtcggaatggaagatgggatcttcccgagcagcagaagccttttggaacaggtt
ctgctcgaggaagaacgacggctgtgctatgttacgatcacccgggctagagaaaagctt
ttcctgagcacgacggaacaaaggatggtctatgggcatattcagagcagtgtgccttcg
cgattcctaaaagaaatacccgaggagcttctgacagaggaggcttcccgtcgtgaaatt
cttggcaggggattcggtctttcttcccaaaccaggaaatatgccggtggtgatgctgct
tccactgcaagcaattcctttgccggacgtaaaagctggaaggacagtggagcgtccgtt
gtcagctccgatcccgggagctttctggtcggtgacaaagtcgggcaccccaaattcggc
cacggcattgtaatgtccgtaaaaggtgaagggaacagtgccgagatcacggttgttttc
agcggtgaagttaagaaactgattgctgagtatgcccgattgtcaaagatctaa
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