Dehalobacter sp. CF: DCF50_p1526
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Entry
DCF50_p1526 CDS
T02279
Name
(GenBank) RNA polymerase sigma factor for flagellar operon
KO
K02405
RNA polymerase sigma factor FliA
Organism
dec
Dehalobacter sp. CF
Pathway
dec02020
Two-component system
dec02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
dec00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
DCF50_p1526
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
DCF50_p1526
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dec03021
]
DCF50_p1526
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
dec02035
]
DCF50_p1526
Transcription machinery [BR:
dec03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
DCF50_p1526
Bacterial motility proteins [BR:
dec02035
]
Flagellar system
Flagellar assembly proteins
Stator
DCF50_p1526
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
HTH_23
UPF0122
HTH_Mga
HTH_28
Radical_SAM_2
ABC2_membrane_3
Motif
Other DBs
NCBI-ProteinID:
AFV05530
LinkDB
All DBs
Position
complement(1559697..1560449)
Genome browser
AA seq
250 aa
AA seq
DB search
MYKGQYDTPKQAVWTEEHLEKFLPLVKRIAGRLAMSLPEHIDQEDLFGYGVFGLLDALQR
FDPSRGVKFETYATLRIRGSIIDGLRTMDWVPHSARQKVKQVTQGYARLENQLGRSPTLE
EAARHLDISVEELNATLLQGQYMTLVSLEDVNSNDNEDITSSPLDLIIDPSSQDSFGQIE
KEEQKQILTEAIERLSEKEKLVVALYYREELTLKEISAVMNLSESRISQIHSQAILRLRG
YLGRQKKNIF
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgtataaaggacaatatgatacacccaaacaagctgtatggacagaagagcatttagag
aaattcttgccgctcgtgaaaaggattgcaggccggctggccatgtctctgccagaacat
attgatcaggaggacttatttggttacggcgtatttggcttgctggatgcgcttcaaaga
tttgacccttctcgcggcgtaaaatttgaaacgtatgcaacgttacgaatcagaggttcg
attattgatggattaagaacgatggattgggttccgcattcagcgcgccagaaggtcaag
caggttacgcagggttatgcccggctggaaaaccaactcggacgcagcccaaccctggaa
gaagcagctcggcacctcgatatttccgttgaggaattgaatgccaccctgctgcaggga
cagtatatgacactcgtgtcgcttgaagatgtcaattccaacgataacgaggacatcacc
agttcacctcttgatctgattattgacccgagctcacaggattcgtttggccagatcgaa
aaagaggaacagaaacagattttgacggaagccattgagagattatcggagaaagagaag
ctggtggtcgctttatattatcgggaagaactgactttaaaagagatatcggcggtgatg
aatttatcagaatcacggatctcacaaattcattctcaggccatcttacgattacgaggc
tatctgggaagacagaaaaagaatattttctaa
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