Dehalobacter sp. CF: DCF50_p1872
Help
Entry
DCF50_p1872 CDS
T02279
Name
(GenBank) DNA-directed RNA polymerase alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
dec
Dehalobacter sp. CF
Pathway
dec03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
dec00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
DCF50_p1872
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dec03021
]
DCF50_p1872
03400 DNA repair and recombination proteins [BR:
dec03400
]
DCF50_p1872
Enzymes [BR:
dec01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
DCF50_p1872
Transcription machinery [BR:
dec03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
DCF50_p1872
DNA repair and recombination proteins [BR:
dec03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
DCF50_p1872
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
TTHA0829-like_ACT
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
AFV05874
UniProt:
K4L621
LinkDB
All DBs
Position
complement(1913005..1913952)
Genome browser
AA seq
315 aa
AA seq
DB search
MLEIEKPNIECVERSEDNTYAKFIIEPLERGYGITLGNSLRRILLSSLPGSAVTSVKIEG
VLHEFSTIPGVLEDVTEIILNIKSLALKGHTDEPRVLRLECEGERVVTARDIITGPDIEI
LNPDLKIATLDKDGRLFMEMNVERSRGYVSAEKNKKADQVIGVIPVDSIFTPIYKVNYAV
EDTRVGMMTDFDKLTLEVWSNGSITPKEATSLAAKILSEHLRLFIGLNDNLGNVEIMVEK
EEEAKDKILEMTIEELDLSVRSYNCLKRAGINSVEELTQRTEEDMIKVRNLGRKSLEEVE
HKLRELGLGFRTPED
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgcttgaaatcgaaaagcccaatattgaatgtgttgagagatctgaagataatacctat
gccaaattcattattgaacccttagagagaggctatggcattaccttggggaattccctg
cgtcgtatcctgctttcttctctacccgggtccgcggttacttcagtaaaaatagaaggc
gtactacacgaattctcaaccattccaggagtcttggaagacgtaactgagatcattctc
aatattaaatccctcgctctcaaaggccatacggatgaaccacgcgttctgcgtttggaa
tgtgaaggggaacgggttgttaccgcaagagacattatcaccggtcccgatattgagatt
ctcaatccagatttgaagatcgccacgttggataaagacgggcgtctcttcatggaaatg
aacgtcgaacgttcccgcggctatgtctcagctgagaagaataaaaaagcagatcaggta
atcggcgttattcctgtcgattccatctttaccccaatttataaagtcaactatgctgta
gaagatacccgggtcggtatgatgactgactttgacaagcttaccctggaagtatggtct
aacggcagtattaccccgaaagaggcaactagtctcgcagccaagattttgagcgaacat
ttgaggctctttatcggactgaacgataatctgggtaatgttgaaatcatggtggaaaaa
gaagaagaggccaaagataagattctggaaatgaccattgaagaactggatctttccgta
agatcttataattgcctgaaacgcgccggcataaacagcgttgaagaactgacacaaaga
actgaagaagatatgatcaaagtacgcaatcttgggcgcaaatctctggaagaagtcgaa
cacaagctcagagaacttgggctgggattccgtactccggaagattaa
DBGET
integrated database retrieval system
