Dehalobacter sp. CF: DCF50_p1994
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Entry
DCF50_p1994 CDS
T02279
Name
(GenBank) 3'->5' exoribonuclease Bsu YhaM
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
dec
Dehalobacter sp. CF
Brite
KEGG Orthology (KO) [BR:
dec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dec03019
]
DCF50_p1994
Messenger RNA biogenesis [BR:
dec03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
DCF50_p1994
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Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Motif
Other DBs
NCBI-ProteinID:
AFV05997
UniProt:
K4L3Y6
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Position
complement(2039290..2040192)
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AA seq
300 aa
AA seq
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MVAFFLIRRVETKTTAGGNRYLDIVLGDAGGEITARMWDCKQEDEALYQSNMLVKIKGSM
AEWQGKKQVKIDKIRAVVEDDQVDIQAFIPVAPYSPEAMYAELLQYLAGMENVKLRETVQ
LLLTEAGEKLLIHPAAVQNHHALRSGLLYHTLTMLKAGEKLADVYTFLDKDLLYAGIMLH
DVAKLDEIDANALGIATEYTVEGQLLGHIVQGIKKIEKAAGKAGLDEETSLLLQHMLLSH
HYEPEYGSPKRPMFPEAEILHYLDIIDARMFDMQKALNETEPGNFSDKLWTLNNRRLYKR
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
ttggtcgcatttttcctgattcgcagggttgaaacgaagactacggctggcggaaaccgg
tatcttgatatcgtcttaggtgacgccggcggggaaataaccgcaaggatgtgggactgc
aagcaggaagatgaagcactgtatcaaagcaatatgcttgtaaagatcaaaggcagtatg
gcggaatggcaaggcaagaaacaagttaagatcgataaaatccgtgcagttgttgaggac
gatcaagttgacattcaagcgtttatacctgtcgcaccgtatagtccagaagcaatgtac
gctgagcttctgcaatacctcgccgggatggagaatgtcaaactaagagaaacagtccag
cttctcctgacagaagccggagagaaactgcttattcatccggctgctgtgcagaatcat
catgccttaaggtcgggactgctgtatcatacgctgacgatgcttaaagctggagaaaaa
ctagcggatgtctatactttcctggataaagatcttctttatgccgggatcatgctgcac
gatgttgccaagcttgatgaaattgatgccaatgccctggggatcgctacggaatataca
gttgaggggcagctgctaggccatattgttcaaggaatcaagaaaattgaaaaggctgca
ggcaaggcgggtctcgatgaggagaccagtctccttcttcagcatatgctgctttcgcac
cattatgagccggaatatggcagtcccaagagaccgatgtttccagaggcagaaatcctt
cattatctggatatcattgacgccaggatgtttgatatgcaaaaagccctgaatgaaacc
gagcctgggaatttttccgataaactttggacactgaataacagaaggctatacaagagg
tga
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