Dehalobacter sp. CF: DCF50_p2076
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Entry
DCF50_p2076 CDS
T02279
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
dec
Dehalobacter sp. CF
Pathway
dec03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dec00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DCF50_p2076
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dec03019
]
DCF50_p2076
03016 Transfer RNA biogenesis [BR:
dec03016
]
DCF50_p2076
Enzymes [BR:
dec01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
DCF50_p2076
Messenger RNA biogenesis [BR:
dec03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
DCF50_p2076
Transfer RNA biogenesis [BR:
dec03016
]
Prokaryotic type
tRNA degradation factors
DCF50_p2076
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
KH-I_KHDC4-BBP
Ribul_P_3_epim
KH_2
Motif
Other DBs
NCBI-ProteinID:
AFV06079
UniProt:
K4L6L6
LinkDB
All DBs
Position
complement(2129912..2132050)
Genome browser
AA seq
712 aa
AA seq
DB search
MTQEVLERSLQVGGRNLSFETGIIGRQAGGAIYARYGDTVISAFATTSSKPREGIDFFPL
TVDLEERFYAVGKIPGGFIKREGRPSEKSILSSRLIDRPVRPLFPDGYRNDVQISAMVMS
VDQDCAPDVTAINAVSAALTISDIPFLGPIAAVVVGLVDGEFVVNPTVAQAEISKMQLTV
AGTKDAIMMVEAGAKEVPEDQMLEAIMFAHEEIKKIAEFIERYREAALEVGLAKAKREVT
PVEIPAEISDKVLAWGYDKLDQAIRIEEKLARQEAVDKVKADALEVFAEEFPEGLKLVTK
ILDDMTHKIVRKLITHEHIRPDGRALDEIRPITIEVGRLPRTHGTGLFTRGQTQVLTVAT
LGAAGDEQIIDGLGLEDSKRYMHHYNFPAFSVGEVRPNRGPGRREIGHGALAERALLPMI
PPESEFPYTLRLVSEVLESNGSSSMASVCGSTLALMDAGVPIKAPVAGIAMGLIKEEDHF
AILTDIQGLEDHDGDMDFKVAGTAEGITALQMDIKIKGVNREILAQALAQAKAGRMFILD
KMLQVLPQPRPNLSPFAPRIITFTIHPDKIRDVIGPGGKIIKKIVEETKVKIDIEDDGQV
FIAAVDGEAGDKAAEIIRSLTQDIEVGKIYKGKVVRIMDFGAFVEVIPGVLGLPGKDGLV
HISQLDVNRVNKVEDVVKLGDEIIVKATGIDKQGRLNLSRKDALGQSQGPKE
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
gtgactcaagaagtcttggaacgctcgctacaggttggaggcagaaacctgtcgtttgaa
accggtatcataggtcgtcaagccggtggggcaatttatgccagatatggagacacagtc
atatctgcatttgcaacgaccagttctaaaccacgggaagggatcgacttttttcctttg
actgttgatttggaagaacgtttttatgccgtaggaaagattcccggtggattcattaaa
agagaaggcagacctagtgagaagtccatattatcgtcaagactgatagacagaccggtc
cgtccgcttttcccggacggttaccgcaacgatgtacagatcagtgcgatggtcatgtcc
gtcgatcaggactgtgcaccggacgtaacggctatcaacgcagtttcggctgcgctcacg
atttccgatattccttttctgggtcctattgccgccgtggttgtcgggcttgtcgacgga
gagtttgtcgttaacccgacggtagcccaggcggaaatcagcaaaatgcagctgacagtt
gctggaaccaaagatgcgattatgatggtcgaggctggtgccaaggaagttcccgaggat
cagatgctcgaagcgatcatgtttgcgcacgaagaaattaaaaagatagcagagtttatt
gagagatacagggaagcagccctggaagtgggacttgccaaagctaaaagagaagtcact
ccggtcgagatccctgcggaaatatccgacaaggtcctggcctggggttatgataagctc
gatcaggctatccgtattgaagaaaaactggcccgccaggaagctgttgacaaggtcaaa
gcagacgcgctcgaagttttcgccgaggaatttcctgagggcttgaaattagttacgaaa
atattggatgacatgacccataaaattgtccgtaagctgattacccacgaacatatcaga
cctgatggccgtgctttggatgagatcagaccgattacgattgaagtcggacgtcttccg
agaacacacggcaccggtctgtttacgcgcggacagacacaggtactcacggttgcgaca
ttaggagctgccggtgatgagcagatcatcgacggtttgggattggaagattccaaacgt
tatatgcatcattataatttcccggccttcagtgtcggcgaagtccgtccgaacagggga
ccgggcagacgtgagattggtcacggcgctttggctgaacgtgccctgctgccgatgatt
cctccggaaagtgaattcccgtatacgctgcgtctggtttccgaagtattggaatccaac
ggatcgagctccatggcttccgtctgcggcagcacactcgctctaatggatgctggggtt
ccgattaaggctccggtagctgggattgcgatgggattgatcaaagaagaagaccatttt
gcgattcttaccgatattcagggtttggaagaccacgacggtgatatggactttaaagta
gccggtactgccgagggcattacagcactgcagatggatatcaagatcaaaggcgtcaac
cgtgaaatcctcgctcaggctctggctcaggccaaggccggcaggatgttcatcctggat
aaaatgctgcaggtcctgccgcagcccagaccaaatctctcgccatttgcaccgcgaatt
attacctttaccattcatcctgacaaaatcagagatgtcatcggaccaggcggcaagatc
attaagaagatcgtggaagaaaccaaggtcaaaatcgatatcgaagatgacggacaggta
tttattgctgcggttgacggtgaagccggagacaaagcagctgagatcattcgctctttg
acgcaggacattgaagtcgggaagatctacaaaggcaaagtcgtccggatcatggatttt
ggcgcctttgtcgaagtcattccaggcgtgcttggacttccgggaaaagatggtctcgtg
catatctcccagctcgatgtgaaccgcgtgaacaaagtagaagatgtcgtcaaacttggc
gatgagatcatcgtcaaggctaccggcattgacaagcagggcagattgaacctatcccgt
aaagacgctctcggacagagccagggaccaaaagaataa
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