Dehalobacter sp. CF: DCF50_p2079
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Entry
DCF50_p2079 CDS
T02279
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
dec
Dehalobacter sp. CF
Brite
KEGG Orthology (KO) [BR:
dec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dec03016
]
DCF50_p2079
Enzymes [BR:
dec01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
DCF50_p2079
Transfer RNA biogenesis [BR:
dec03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
DCF50_p2079
Prokaryotic type
DCF50_p2079
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Rv2175c_C
HerA_C
Motif
Other DBs
NCBI-ProteinID:
AFV06082
LinkDB
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Position
complement(2133611..2134495)
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AA seq
294 aa
AA seq
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MDGIINVLKPVGMTSTDVVRWLLRKTKAGKAGHIGTLDPGAAGVLPICLGKATRLAEYHS
DQGKSYRAEITLGITTDTQDAFGQELSRIVPIVSREQFVNTLENFLGVIEQEPPMYSAVR
KNGRHLYEYARQGIDVAREKRQVEIKRLDLVEWHEETFPRVLFDVECSKGTYIRTLCHDI
GVALGCGAHMSFLLRLGAGKFTLDSAYTLEEIDQTLAGGDEHMLLAPEWGLTLPKASIPA
YRLAAFRNGLSTGGDLVDAEVYGEQLPVQVFCAGRFIGIGNWENGCLCPNKVMG
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
ttggacgggatcattaatgttttaaaacctgttggcatgacctccacagacgttgttagg
tggctgcttcgaaaaacaaaagccggcaaggcaggccatattgggacgctggatcccgga
gctgccggggtgcttccgatttgccttggcaaggcaacgcggctggcagaataccacagc
gaccaggggaaaagttatagagctgagattacactcggaatcacgacagatacgcaggat
gctttcggacaggaactatcgaggattgtgcctatagtatcacgagagcaatttgtaaat
acactggaaaattttcttggtgtcattgaacaggaaccgcctatgtattccgctgtcaga
aaaaatggcaggcatctgtacgaatatgcccgccaggggatcgatgttgcaagagaaaaa
agacaggttgagatcaagcggctggatctggtggaatggcatgaagagacgtttccaaga
gttctattcgatgtggaatgttccaaaggaacgtatatacgcactttatgtcacgatatt
ggcgttgccttgggctgcggtgcacatatgtcctttttgctcagattaggcgcaggcaag
tttacgctggattccgcctacacactggaagagattgaccaaacacttgccggcggcgat
gaacacatgctcctggctccggaatggggactcacactgccaaaggcaagtataccggcc
tatcggcttgccgctttccgaaacgggctttctaccggaggggatcttgttgatgctgaa
gtgtacggggaacagcttcctgttcaggtattttgtgcgggacgttttattggcataggg
aattgggaaaacggatgtttatgccccaataaggtcatgggttag
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