Dehalobacter sp. CF: DCF50_p409
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Entry
DCF50_p409 CDS
T02279
Name
(GenBank) putative DNA helicase
Organism
dec
Dehalobacter sp. CF
Brite
Spliceosome [BR:
dec03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
DCF50_p409
Complex C
U4/U6.U5 tri-SnRNP related factors
DCF50_p409
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Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
DSHCT
ResIII
DEXQc_Suv3
nSTAND3
AAA_30
AAA_16
IstB_IS21
Helicase_C
AAA_22
PhoH
AAA_19
Sigma54_activat
ATPase_2
Mg_chelatase
Motif
Other DBs
NCBI-ProteinID:
AFV04415
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Position
complement(428329..430584)
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AA seq
751 aa
AA seq
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MISEYQGLKLDQFQMDAIEAINHGHSVIVSAPTGTGKTMVADYLVEKSIREGQRIIYTAP
IKALSNQKFKDFSRQFGSKTIGIMTGDVVINPGAPLLIMTTEIFRNQVITNDPELEHVSY
IIFDEIHWLNDEDRGTVWEESIILAPPNIKILGLSATIANAAELKGWIEAIRKDTVVLIE
EQQRIVPLEYYYFCQDTGIIGYDDLIRFYYQKLKSTDRTDNSPLFKPTSHLDLIKTVDKQ
YLPTLYFVFSRKQCADKAHELANIKNYLSSEQSKEVKNIFLEHFGAEDTWSSSTRKLFRV
CRKGIAYHHAGLLPLQKSVVEDLFLAKTISVLYCTETFSVGINYPVKAVCFDSLNKYDGR
SFRALANHEFFQMSGRAGRRGIDEIGYSFAIVDLNYFEKEPPVKFDIAKLEPLTSQFRLS
YNTVLNLLATLSPEQIETYFKKSFAAHSYILTAQKTEEEIRLLSEQSAQAKENLCEHVGT
YRCPLNYYPKKKELDRLHKAYAKLDPRRRNKIFGRQMHRKIMKWEKILKTVPQKCTRKQN
DSCKSFAGNWMNLEKEITDLKNQLFSMPDYNTFNSEFERKKALLQQIGYIGNDKLLPRGE
LARYIYVQEILVTELIYSGIIEQLDDDQLTALISCIDYESKRNEYFQKFDQIDFKPVREI
LNYIQSICGPDAVRFESKAAVLAYYWSKGAALIELQLLCTLDEGDIIAVLRRTIDLLRQM
REAVTDQSLRERFSVCIKKLDRDEASIQELN
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
gtgatttccgagtatcagggactaaaactcgaccaatttcaaatggatgcgattgaagca
atcaatcacgggcattccgtcattgtctcagcccctaccgggacaggaaaaacaatggta
gcagattatctggtcgagaaatcgatccgcgaaggccaacggatcatctataccgcgcct
atcaaagccttaagcaatcagaagtttaaagacttttcccggcaatttggcagcaagacc
attggaatcatgaccggggatgttgtgatcaatcctggcgccccgctactgatcatgacg
acagagatcttccgcaaccaggttatcaccaatgatccggaactggagcacgtttcctat
atcatctttgacgaaattcactggctcaatgatgaggacagaggtacagtctgggaagaa
tccatcattctcgctccgccaaatattaagattctgggcttaagtgcgacaattgccaat
gctgcggaactgaagggctggatcgaggccatccgcaaagacaccgttgtgttgatcgag
gaacagcaaaggatcgttcctctggaatattattatttttgtcaggacaccggcatcatc
ggctatgatgacctgatcaggttctattatcagaagcttaaatccacggacagaaccgat
aattccccgctgtttaaaccgacgtcacatcttgacctgatcaaaactgttgataaacaa
tatcttcctaccctctattttgtattcagtagaaagcaatgcgccgataaagcgcatgaa
ctggccaatatcaaaaactacctgtcgtcggaacaaagcaaagaagtgaaaaacattttt
ttggagcattttggtgctgaagatacttggtcctcttccacgcgcaagttattcagggtc
tgccggaaaggtattgcctatcaccatgccgggctgctgcctttgcagaaatccgtcgta
gaggatcttttcctggccaagacgatctcagttctgtactgtaccgagaccttcagtgtc
gggatcaactatcctgtcaaggccgtctgctttgattccctaaacaaatacgacggacgc
agtttcagggctctggcaaaccacgaattttttcagatgtccggcagagccggccgacgc
ggtattgacgagatcggttattcctttgcgattgttgatttgaattactttgaaaaagaa
ccgccggtaaaatttgatattgccaagttagaacctctgaccagtcagtttcggctttcc
tataatacagttttgaatctcctggcaacattatcgccggagcaaatcgaaacctatttc
aaaaaaagttttgctgctcattcctatatcttgaccgcacaaaaaacagaagaagagatt
cgtcttctgtccgagcaatcagcccaagccaaagagaacctttgtgagcatgtcgggacc
tatcggtgtccgctgaattactacccgaaaaagaaagaattggacaggcttcacaaagcc
tatgccaaattggacccgcgacgccgcaataagattttcgggcgtcagatgcaccgaaaa
atcatgaaatgggagaagatccttaagactgttccccagaaatgtaccagaaaacaaaac
gacagctgtaaatccttcgccggaaactggatgaacctcgaaaaagaaatcacggacctc
aagaatcaattgttctcaatgccggattacaacacatttaattccgaatttgaaagaaaa
aaagccctgctgcagcaaataggctatatcggaaatgacaagcttttgccgcgtggggag
ctcgccagatatatttatgtgcaggaaatcctggtaaccgaattgatttactcaggaatc
atcgaacagctggatgatgaccagctgactgcgctgatttcctgtattgattatgaaagc
aaacgtaatgagtatttccagaagtttgaccaaattgattttaagcctgtcagggaaatc
ctgaattatattcagagcatctgcgggcctgacgctgtgcgctttgaatccaaggcggcc
gtccttgcgtattattggagcaaaggcgccgcattaatcgagcttcagctgctctgcacc
ctcgatgaaggagatattatcgcggtcttaaggcggaccatcgatttactgcgccagatg
cgggaagccgtaacagaccagtcgttaagagaacgcttcagcgtctgcatcaagaaactg
gacagagatgaggcttcgatccaagagttaaattaa
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