KEGG   Dehalobacter sp. CF: DCF50_p5
Entry
DCF50_p5          CDS       T02279                                 
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
  KO
K02470  DNA gyrase subunit B [EC:5.6.2.2]
Organism
dec  Dehalobacter sp. CF
Brite
KEGG Orthology (KO) [BR:dec00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:dec03032]
    DCF50_p5 (gyrB)
   03400 DNA repair and recombination proteins [BR:dec03400]
    DCF50_p5 (gyrB)
Enzymes [BR:dec01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     DCF50_p5 (gyrB)
DNA replication proteins [BR:dec03032]
 Prokaryotic type
  DNA Topoisomerases
   DCF50_p5 (gyrB)
DNA repair and recombination proteins [BR:dec03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      DCF50_p5 (gyrB)
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c HATPase_c_3 GyrB_hook
Other DBs
NCBI-ProteinID: AFV04011
UniProt: K4L094
LinkDB
Position
4268..6202
AA seq 644 aa
MQNESELANQINPGSDYNAGQIEVLEGLEAVRKRPGMYIGSTSSRGLHHLVYEIVDNSID
EAMAGYCDEIEVIIHQGESITVQDNGRGIPVDMHAKMQKPAVEVALTVLHAGGKFNNEAY
KVSGGLHGVGMSVVNALSVNLRVEIKKDGKKYSQEYSRGKTLTELKEIGTYQGRSGTMIT
FQPDPEIFEDIVYDYEVLAHRLKELSFLNKNVMITLIDERNEAKDVYNHNNGLIDFVEYL
NKNKDPIHQKAIVFETEKDNTKVEIALQYNESYTETLFSYANNINTTEGGTHEAGFKAAL
TRVVNDYARKNNILKGNENNLSGEDVREGLTAIISVKIMEPQFEGQTKTKLGNSEVRSIV
DSVVGEGLTTFFEENPAVAKKIVEKGLQATRARLAARKARDLTRRKSALESTSLPGKLAD
CTWKDPRYCEMYIVEGDSAGGSAKQGRNQKFQAILPLRGKILNVEKARLDRILGNTEIRA
MITALGTGISEEFDIEKARYHKVVIMTDADVDGAHIRILLLTFFYRYMKPLIENHYVYIA
QPPLFKVKNGKQIQYAYSDKELSKVMETVGRDKTEIQRYKGLGEMNPEQLWETTMDPESR
TILQVQMDDAMRADELFTMLMGDKVEPRKEFIQKHARDVRNLDI
NT seq 1935 nt   +upstreamnt  +downstreamnt
ttgcaaaatgaatcggaattagcaaatcaaataaatcccggatctgattataatgccggc
cagatagaagtactcgaaggattagaagctgttcgaaaacgccccggtatgtacatcggt
tccaccagcagccgtggtttgcaccatctggtttatgagatcgttgacaatagcatcgat
gaggctatggctggttactgcgatgaaatagaagttattattcatcagggagagagtatt
actgttcaagataatggccgcggcataccggttgatatgcatgcaaagatgcaaaagccg
gcagtggaagttgccttgacagtattgcatgccggcggaaaatttaataacgaggcttat
aaggtttctggtggcctgcacggggtcggcatgagcgttgttaatgcgctttccgttaat
ttgcgtgtcgagatcaaaaaagatgggaaaaagtacagccaggaatattcccgcggcaaa
acactgacggaactcaaggaaatcggtacgtaccaaggaagatccgggacaatgattact
ttccagcctgatccggaaatcttcgaagatatcgtttatgactatgaagttctggcgcat
cgtttgaaggagctttcatttctgaataaaaatgtcatgattactctgattgacgagcgg
aacgaggccaaagatgtctataatcacaataatgggctgattgattttgtagaatattta
aataaaaataaagatccgattcatcagaaagcgattgtatttgagacggagaaagataat
acaaaggttgagatcgcccttcaatataacgaaagttataccgaaaccttgttttcgtat
gctaataatatcaataccacagaaggcgggacgcacgaagcgggatttaaagcggccctg
accagagttgttaatgactacgcgcgtaaaaacaatattttaaaaggcaatgagaataac
ttaagcggtgaggatgtcagagaaggccttacagccattatttcggttaagatcatggaa
cctcagtttgaaggacagacaaagaccaagctgggtaacagtgaagttagatccattgtc
gacagcgtggttggtgaaggtttaacgactttttttgaagaaaatccagccgttgccaaa
aagattgttgaaaaaggcttgcaggctacccgggcaaggcttgccgcccgtaaggccaga
gatcttacccgcagaaaaagtgcattggaaagtacttctttgccgggtaaactggccgac
tgcacctggaaagatccaagatactgtgaaatgtacattgtcgaaggagacagcgctggc
ggctcagctaaacaaggaagaaatcaaaaattccaggcgattctgccgttgcgtggaaaa
attctgaacgtcgaaaaagcccgcttggacaggatcctgggaaatacagaaataagagca
atgattacagcgcttggtaccggaatatctgaagagtttgatattgaaaaagcccgttat
cataaagttgtgattatgacagatgctgatgtcgacggtgcacatatccggattctctta
ctgacatttttttacaggtatatgaaaccgctgattgaaaatcattatgtttatattgcg
cagccaccgctttttaaggttaaaaacggcaaacaaattcaatatgcttatagtgataaa
gaattaagtaaggttatggaaactgtcggtagagataagacagaaatccaacgctataaa
ggtcttggtgaaatgaatcccgaacagctttgggagacaacgatggatcctgaatcccgg
accatacttcaggtccaaatggatgatgccatgagagcagatgagctattcacgatgctg
atgggtgacaaagtagagccccgtaaggaatttattcaaaaacatgccagggatgtacga
aatctggatatttaa

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