Entry |
|
Symbol |
gyrB
|
Name |
(GenBank) DNA gyrase subunit B
|
KO |
|
Organism |
|
Brite |
KEGG Orthology (KO) [BR:dec00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:dec03032]
DCF50_p5 (gyrB)
03400 DNA repair and recombination proteins [BR:dec03400]
DCF50_p5 (gyrB)
Enzymes [BR:dec01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
DCF50_p5 (gyrB)
DNA replication proteins [BR:dec03032]
Prokaryotic type
DNA Topoisomerases
DCF50_p5 (gyrB)
DNA repair and recombination proteins [BR:dec03400]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
DCF50_p5 (gyrB)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
4268..6202
|
AA seq |
644 aa
MQNESELANQINPGSDYNAGQIEVLEGLEAVRKRPGMYIGSTSSRGLHHLVYEIVDNSID
EAMAGYCDEIEVIIHQGESITVQDNGRGIPVDMHAKMQKPAVEVALTVLHAGGKFNNEAY
KVSGGLHGVGMSVVNALSVNLRVEIKKDGKKYSQEYSRGKTLTELKEIGTYQGRSGTMIT
FQPDPEIFEDIVYDYEVLAHRLKELSFLNKNVMITLIDERNEAKDVYNHNNGLIDFVEYL
NKNKDPIHQKAIVFETEKDNTKVEIALQYNESYTETLFSYANNINTTEGGTHEAGFKAAL
TRVVNDYARKNNILKGNENNLSGEDVREGLTAIISVKIMEPQFEGQTKTKLGNSEVRSIV
DSVVGEGLTTFFEENPAVAKKIVEKGLQATRARLAARKARDLTRRKSALESTSLPGKLAD
CTWKDPRYCEMYIVEGDSAGGSAKQGRNQKFQAILPLRGKILNVEKARLDRILGNTEIRA
MITALGTGISEEFDIEKARYHKVVIMTDADVDGAHIRILLLTFFYRYMKPLIENHYVYIA
QPPLFKVKNGKQIQYAYSDKELSKVMETVGRDKTEIQRYKGLGEMNPEQLWETTMDPESR
TILQVQMDDAMRADELFTMLMGDKVEPRKEFIQKHARDVRNLDI |
NT seq |
1935 nt +upstreamnt +downstreamnt
ttgcaaaatgaatcggaattagcaaatcaaataaatcccggatctgattataatgccggc
cagatagaagtactcgaaggattagaagctgttcgaaaacgccccggtatgtacatcggt
tccaccagcagccgtggtttgcaccatctggtttatgagatcgttgacaatagcatcgat
gaggctatggctggttactgcgatgaaatagaagttattattcatcagggagagagtatt
actgttcaagataatggccgcggcataccggttgatatgcatgcaaagatgcaaaagccg
gcagtggaagttgccttgacagtattgcatgccggcggaaaatttaataacgaggcttat
aaggtttctggtggcctgcacggggtcggcatgagcgttgttaatgcgctttccgttaat
ttgcgtgtcgagatcaaaaaagatgggaaaaagtacagccaggaatattcccgcggcaaa
acactgacggaactcaaggaaatcggtacgtaccaaggaagatccgggacaatgattact
ttccagcctgatccggaaatcttcgaagatatcgtttatgactatgaagttctggcgcat
cgtttgaaggagctttcatttctgaataaaaatgtcatgattactctgattgacgagcgg
aacgaggccaaagatgtctataatcacaataatgggctgattgattttgtagaatattta
aataaaaataaagatccgattcatcagaaagcgattgtatttgagacggagaaagataat
acaaaggttgagatcgcccttcaatataacgaaagttataccgaaaccttgttttcgtat
gctaataatatcaataccacagaaggcgggacgcacgaagcgggatttaaagcggccctg
accagagttgttaatgactacgcgcgtaaaaacaatattttaaaaggcaatgagaataac
ttaagcggtgaggatgtcagagaaggccttacagccattatttcggttaagatcatggaa
cctcagtttgaaggacagacaaagaccaagctgggtaacagtgaagttagatccattgtc
gacagcgtggttggtgaaggtttaacgactttttttgaagaaaatccagccgttgccaaa
aagattgttgaaaaaggcttgcaggctacccgggcaaggcttgccgcccgtaaggccaga
gatcttacccgcagaaaaagtgcattggaaagtacttctttgccgggtaaactggccgac
tgcacctggaaagatccaagatactgtgaaatgtacattgtcgaaggagacagcgctggc
ggctcagctaaacaaggaagaaatcaaaaattccaggcgattctgccgttgcgtggaaaa
attctgaacgtcgaaaaagcccgcttggacaggatcctgggaaatacagaaataagagca
atgattacagcgcttggtaccggaatatctgaagagtttgatattgaaaaagcccgttat
cataaagttgtgattatgacagatgctgatgtcgacggtgcacatatccggattctctta
ctgacatttttttacaggtatatgaaaccgctgattgaaaatcattatgtttatattgcg
cagccaccgctttttaaggttaaaaacggcaaacaaattcaatatgcttatagtgataaa
gaattaagtaaggttatggaaactgtcggtagagataagacagaaatccaacgctataaa
ggtcttggtgaaatgaatcccgaacagctttgggagacaacgatggatcctgaatcccgg
accatacttcaggtccaaatggatgatgccatgagagcagatgagctattcacgatgctg
atgggtgacaaagtagagccccgtaaggaatttattcaaaaacatgccagggatgtacga
aatctggatatttaa |