KEGG   Dehalobacter sp. CF: DCF50_p51
Entry
DCF50_p51         CDS       T02279                                 
Name
(GenBank) Type III restriction enzyme, res subunit:DEAD/DEAH box helicase, N-terminal
  KO
K01156  type III restriction enzyme [EC:3.1.21.5]
Organism
dec  Dehalobacter sp. CF
Brite
KEGG Orthology (KO) [BR:dec00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:dec02048]
    DCF50_p51
Enzymes [BR:dec01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.5  type III site-specific deoxyribonuclease
     DCF50_p51
Prokaryotic defense system [BR:dec02048]
 Restriction and modification system (R-M system)
  Type III R-M system
   DCF50_p51
SSDB
Motif
Pfam: RE_endonuc ResIII DEAD PhoH DUF4845 Tsr0524-like AAA_22
Other DBs
NCBI-ProteinID: AFV04057
LinkDB
Position
60407..63490
AA seq 1027 aa
MAKRIAFQFDDELDYQLKAIQSTVDLFKGLPRQTDGIYRPSRSKKVGEGDPVRNQSIVAG
SRLLQNLRQVQLENKLFADNVLENNNFTVEMETGTGKTYVYLRTILELYKEYDFKKFMIV
VPSIAIRKGVEKSIDQLRDHFKRLYDVDLSKHSFIYDSNNPKKVSSSLVETNDLSICVLN
IQAFNKDNNKIRSEDEYGQILWEDIKYIKPIVIIDEPQKIEGQKGKKSKSLQAIDDIEPL
FVLRYSATHKQLYNQIYKLDSYAAYKNDLVKKITVKTVNGVIERDYPYIRYVAFTKDLKA
RIEMFSQKQGDSIRFKTFEVSAGASLEDLSGGLVQYRNMRIAEEPHKLKPLKIATTDGTI
TLELGESNNGLEDNEATRIQIRLAIRNHFEKQFAILKSGKKMKALTLFFVDAVSKVRDNT
RPDGRGEYLRIFDEEYQSAIKGYEKQLAKYKEYFPEHQDILKVREGYFAIDKKNNEVEIE
DWDDSKSELDVKAKSQEDIDRGISLILERKDELISFEEPLSFIFSHSALREGWDNPNVFT
LCTLKNGSSDIAKKQEIGRGLRLPVDITGNRCLDSEVNELTVIANDSYENFSRVLQEDFN
QNMNFNKNEVTADILTVTLEKAGVPKEKITAELVDTFKQELMRKGIFDSNNILGKNVEQT
SKLLEGLVFENEILNEHALLLKENFAEYMVQKGSQRIEIKNGDNEPYVNTIRAFVSQEEF
QEIYFGLSSNLTKRTLYKCNVDKDKFVSGCIEEINTYLQYFKVNKSVNIATGKAGFNDAQ
MFEMVKSGDKTFDIDVGMKVIPKSDFEVVNYIMHHTMLPRLAIFNMLAGIEKRDALNFQD
ILDRVTQKILVRLNDAKAANITSYEVIDGYELDEGQIFATDTISEEDFNDEWRIFKSNPH
RKNALNEYYKMDSKGEKEFAEKLEANDNVILFTKLKKGGFVIDTPYGNYSPDWAVVCRKD
GLEAGAVGIYFIVETKAGKLEKDLTDVEVNKIRCGELHFKAVSELVKFNWVNSYEDFKTK
FGVKESM
NT seq 3084 nt   +upstreamnt  +downstreamnt
gtggcaaagagaattgcattccaattcgacgatgaattggactatcagctaaaagcaatc
caatccactgtggacttgtttaagggacttcctcgtcaaacagatggaatatacagacca
agccgctccaagaaggttggcgaaggtgatcccgtaagaaaccagagtattgtggcaggc
agcaggctgctgcaaaatctaagacaggtgcagcttgaaaacaagctgtttgcagataac
gtgcttgaaaacaacaactttaccgtagagatggaaaccggtaccggtaaaacctatgtg
tatctgcgtaccattttagagttatacaaggaatatgattttaaaaagtttatgattgtg
gtgccaagcatcgcaatccgcaagggcgtggaaaagtccatcgatcaattaagagaccac
tttaaaaggctctatgatgtggatttgtccaagcacagctttatttatgacagcaacaac
cccaaaaaggttagctcaagccttgtggaaaccaatgatttgagcatttgcgtcctcaac
attcaagcctttaacaaggacaacaataaaatccgcagcgaagatgaatacggtcagatt
ttgtgggaggatatcaaatacatcaaacccattgtaattattgacgagccacaaaagatt
gaaggtcagaaaggaaagaaatccaagtcattgcaagccattgacgatatcgagcctttg
tttgtgctccgctactctgccacccataaacagctatacaatcagatttacaagctggat
tcttatgccgcttataagaatgatttggttaagaaaattacagtcaagacggtaaacggc
gttatagagcgtgattacccttatattcgctatgttgccttcacaaaagacttaaaggca
aggattgaaatgttctcccagaagcaaggcgattctattcgctttaaaacctttgaagtt
tcagcaggtgcttctctggaggatttatccggcggtctggtgcaatatcgaaatatgcgt
atagcagaagaaccacataagctcaagcctttaaaaatagccaccacagacggcacgata
acccttgaacttggagagagcaataacggtcttgaggataatgaggctacccgcattcag
ataaggcttgccatcagaaatcactttgaaaagcagtttgcaattttaaagagcggaaaa
aagatgaaagccttgacccttttctttgtggatgcagttagcaaggtacgagacaatacc
cgccctgatggacgtggagaatatctgcgtatttttgatgaagagtatcaaagtgcaata
aaaggctacgaaaagcagcttgcaaaatataaagaatatttccccgagcatcaggatatt
ttaaaggtgcgtgagggctattttgccatcgataaaaagaacaatgaagtcgaaattgaa
gattgggacgacagcaaaagcgagttagacgttaaggcgaaatcccaggaggatattgat
cgtggtatcagcttgattcttgaaagaaaagacgagcttatttcctttgaagaaccgcta
agctttattttctctcattcagcgcttcgtgaaggctgggataatccaaatgtatttacc
ctttgtactctgaaaaacggaagctccgatattgcaaagaaacaggaaatcgggcgtggt
ttaagacttccggttgatattacagggaaccgctgtttggattctgaagtcaatgagctg
acggttattgcaaacgacagctatgagaatttttcacgggtgctgcaagaggacttcaat
caaaacatgaatttcaacaagaatgaagtaactgccgatatcctgactgttacccttgaa
aaagcaggtgttccgaaagaaaaaatcactgccgaactggttgacacctttaagcaggag
ctaatgcgtaaaggcatctttgatagcaataatattctcggcaaaaacgtggagcaaaca
tccaagctccttgaaggtcttgtttttgaaaatgagatactaaatgagcacgctctattg
cttaaggagaattttgcagagtacatggtgcagaaaggctctcagcgcattgaaattaaa
aatggtgataacgaaccctatgtgaatacaatccgtgcttttgtatcccaagaggagttt
caggaaatatactttggacttagcagcaatttgacaaagcgcaccctttataaatgcaat
gtagataaggacaagtttgtttccggctgcattgaggaaataaatacctacctgcaatac
tttaaggtcaataagtcagtcaatatcgcaaccggcaaggctggctttaacgatgcccag
atgtttgaaatggtgaaatcaggcgataagacttttgatattgatgtgggcatgaaggtt
attcctaaaagcgactttgaggtcgttaactatatcatgcaccacaccatgctgccccgc
cttgctatttttaacatgctggctggaattgaaaaaagggacgcactaaacttccaagac
attctcgacagagtgacacaaaagattttggtgcgattaaatgatgccaaagcagcaaat
ataacttcctatgaagtcattgatggttatgagctggacgaagggcagattttcgctaca
gacaccattagcgaagaagattttaacgatgaatggcgtattttcaagtcgaacccacat
agaaaaaacgccttaaatgaatattacaaaatggatagcaaaggcgaaaaggaatttgca
gaaaaacttgaagcaaatgacaatgttatcttattcaccaaacttaaaaaaggtggtttc
gtaatagacaccccttacggaaactactcccccgactgggcggttgtatgtagaaaagat
ggacttgaagcaggtgctgtaggaatttacttcatcgtagaaacaaaagccggaaaactt
gaaaaggacttaaccgatgttgaagtaaacaaaatacgttgcggcgaattacacttcaag
gctgtatctgaattggttaaattcaattgggtcaatagctatgaggattttaaaacaaag
ttcggtgtaaaagaaagtatgtaa

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