Dehalobacter sp. CF: DCF50_p6
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Entry
DCF50_p6 CDS
T02279
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
dec
Dehalobacter sp. CF
Brite
KEGG Orthology (KO) [BR:
dec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dec03032
]
DCF50_p6 (gyrA)
03400 DNA repair and recombination proteins [BR:
dec03400
]
DCF50_p6 (gyrA)
Enzymes [BR:
dec01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
DCF50_p6 (gyrA)
DNA replication proteins [BR:
dec03032
]
Prokaryotic type
DNA Topoisomerases
DCF50_p6 (gyrA)
DNA repair and recombination proteins [BR:
dec03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
DCF50_p6 (gyrA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
AFV04012
UniProt:
K4KY66
LinkDB
All DBs
Position
6217..8685
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AA seq
822 aa
AA seq
DB search
MSMELFSGKVLPIEISDELKKSFIDYSMSVIVSRALPDVRDGLKPVHRRILYAMNELGMT
PNKGYSKSARLVGDCMGKYHPHGDSSIYDASVRMAQNFSSRYPLIDGHGNFGSIDGDSAA
AMRYTEMKMAPLATYMLADIDKDTVNFSPNYDEREKEPDVLPAKFPNLLVNGSSGIAVGM
ATNIPPHNLGEVIDGVVYLMDSEDNEDGAPRPGIRDLMKFIKGPDFPTGAQIMGTEGIIS
AYTTGRGSIKVRAKANIEKIEKNGKMQIVVTEIPYVVNKSRLIEKIAELVQEKKIEGITD
LRDETTMKGIRIVIELRRDVTPQVILNQLYKHTQMEDSFGINMLALVDNTPKVLNLQEIL
EYFIKHQKEVIVRRSRFELKKAEDEAHIVEGLRKALDYIDEVIEIIRSSKDDDIAKAKLI
LRFDFSDRQAQAIMDMRLKRLTGLEREKLDAQYQRLMDEIAYLTAVLNSDKMVRGIIKTE
LKEIRDKFADPRRSEITFDATKMEIEDLIADEDVVITVTHRGYIKRLPLNTYHSQRRGGR
GVNGMSTGENDFVESLFIASTHHHILFFTSRGKVYRLRAHEIPEASRTAKGTAIVNLLSL
AQDEKVTATIAVKEFKDQFNLLTATKNGIVKKTSLQDYDTKRSDGLIALTLDENDELIGV
RLTKQDDDVVIATRLGLAIRFSEEDVRAMGRTARGVRGISLRKDDYVIAMDVVDKTASDL
ELLTVTENGFAKRSELSEFRIQGRGGKGIIGHRVTSKTGPLAAVKVVTADQELMVITDEG
IVIRQEVSGISVQGRSAQGVTAMRTGESKVVAVAKFVSKEEE
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atgtccatggaactttttagcggcaaggttttgcccattgaaatttccgatgaattaaaa
aaatcatttatagattattccatgagcgttattgtcagccgagccttgccggatgtacgc
gacggactgaaaccggttcatcgcagaattctttatgcgatgaatgaattagggatgacg
ccgaataaagggtatagcaaatcggccagactggtcggggattgcatggggaaatatcac
ccacatggagattcatcgatctatgatgcgtctgtcaggatggcgcagaatttttccagc
cgttatcctttaattgacggacatggcaactttggttccatcgatggcgattcagcggct
gccatgcgttatacagagatgaagatggctccgctggctacttatatgctggctgatatt
gataaggataccgtcaattttagtccgaactatgatgaaagagaaaaagagccggacgtt
ttgccggcaaaatttccgaatctattggttaacggttcttccgggattgctgtcgggatg
gccacgaatataccgccgcacaatctgggagaagtcatcgatggcgtcgtatatttgatg
gacagtgaggataacgaagatggagcacctcgacctggaatcagagatctgatgaaattt
attaaaggacctgattttccgaccggtgcccaaatcatgggcacggaaggaatcatcagc
gcgtacacgactggcaggggatcaatcaaggtccgggcgaaggccaatatcgaaaaaatc
gaaaaaaacgggaaaatgcagatcgttgttacggaaattccgtatgtggtcaataagtcc
cggctgattgaaaagatagctgaacttgttcaggaaaagaaaatcgaaggtattaccgat
ttgcgcgatgagaccacaatgaaagggattcgtattgtgattgaactgcgcagggatgtt
acacctcaggtcattctgaatcagttgtataagcatacccagatggaagatagtttcggg
atcaatatgctggcgctggttgacaataccccgaaagtactcaacctgcaggaaattctg
gaatattttatcaaacatcaaaaggaagttattgtccggcgcagccggtttgaactgaag
aaagcagaagatgaggcacatattgttgaaggactgcgcaaggcgctggactatatcgat
gaagtcattgagatcattcgttcttccaaggatgatgacatcgccaaagccaaactgatc
ctgcgctttgatttcagcgacagacaggcccaggcgattatggacatgcgtttaaagcgc
ctgactggtttggaacgtgaaaaactggatgcccagtatcaaaggctgatggatgagatt
gcttacctgacggcagttttgaattcggacaaaatggttcgtggaattattaaaactgaa
cttaaggaaatcagggataaatttgcggacccgagacgttcagaaattacctttgatgcg
acgaagatggaaattgaagatctgatcgcggatgaggacgtcgtaattacggtcacacac
agagggtatatcaaaagactgcccttaaacacctatcacagccagagaagaggtggacgt
ggtgtcaacggcatgtctaccggagaaaatgattttgtggagagcctgtttattgcctct
acacatcatcatattcttttcttcacttcacgtggcaaggtttaccgtctgcgggcgcat
gaaatacctgaggcaagccggaccgctaaagggactgcgattgtgaaccttttgagtctt
gcgcaggatgaaaaagtcactgcgacgattgctgtcaaggagtttaaagaccaattcaac
ctgctgacagcaacgaaaaacgggattgtcaaaaagacttcgctccaggattacgacaca
aaaagaagtgatggcttgattgcgctgacgctggatgaaaatgacgaactgatcggcgtg
cgcctcacgaaacaagatgatgatgtcgtgattgcaacccgtctgggcttggcgattcgt
ttctctgaggaagatgtcagagccatgggacggacagcccgcggcgtaagaggaatctct
ctcaggaaagatgactatgtcattgccatggatgtcgtggataaaaccgctagtgatttg
gaattgctgaccgttaccgagaatggctttgctaaacgaagcgaactcagtgaattccgg
atccagggacgcggtggcaaaggcattatcgggcatagagtaacttctaagactgggcct
ctggccgccgtcaaggtcgtcaccgccgatcaggaactgatggtcattaccgatgaaggc
attgtgatccgtcaggaagtcagcggcatctccgtccaggggagatcggcccagggagtc
actgctatgagaaccggtgaaagcaaggtcgtggccgtagctaaatttgtaagcaaagaa
gaagaataa
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