Dehalobacter sp. CF: DCF50_p7
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Entry
DCF50_p7 CDS
T02279
Symbol
pdxS
Name
(GenBank) Pyridoxine biosynthesis glutamine amidotransferase synthase subunit
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
dec
Dehalobacter sp. CF
Pathway
dec00750
Vitamin B6 metabolism
dec01100
Metabolic pathways
dec01240
Biosynthesis of cofactors
Module
dec_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
dec00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
DCF50_p7 (pdxS)
Enzymes [BR:
dec01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
DCF50_p7 (pdxS)
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Gene cluster
GFIT
Motif
Pfam:
SOR_SNZ
ThiG
Dus
NMO
His_biosynth
NanE
TetR_C_27
FMN_dh
IGPS
TMP-TENI
Motif
Other DBs
NCBI-ProteinID:
AFV04013
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Position
8754..9638
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AA seq
294 aa
AA seq
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MVEVASWKVKTGLAEMLKGGVIMDVTTPEQAKIAEEAGACAVMALERVPSDIRAAGGVAR
MADPTIVNKIMEAVTIPVMAKARIGHFVEARILEALGADYIDESEVLTPADDLYHIDKHN
FKVPFVCGARNLGEALRRIGEGAAMIRTKGEPGTGNVVEAVRHMRTVMADIRRLTTMPKE
ELMTAAKEMAAPYDLVLYVAEHGKLPVVNFAAGGIATPADAALMMQLGCDGIFVGSGIFK
SSEPAKRARAIVLATTHHNDPDILAKLSEEIGEAMPGLEISSIAPAERMQDRGW
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atggttgaggtagcttcatggaaagtaaaaacaggcttggcggagatgttaaaaggcggc
gtcattatggatgtcacaacacccgagcaggcaaaaatagcggaggaagccggggcctgt
gcagttatggccctggaaagagtgccctctgatatccgggcagcaggcggtgtggcaaga
atggccgatccgaccattgttaataaaatcatggaggctgtaaccattccagttatggct
aaagcaagaattggacactttgtcgaagcccgcatcctggaagcacttggcgcggattac
attgatgagagcgaagttctgactcctgccgacgacctttaccacattgacaagcataat
tttaaagtgccatttgtctgcggtgcgcgcaatctcggtgaagccctgcgtcggattggc
gagggtgctgcgatgatccgcaccaaaggtgaacccggaacaggcaatgtggttgaggca
gtgcgtcatatgcggacggttatggccgatatccgccgtctgaccaccatgccgaaagag
gaactgatgaccgcagccaaggaaatggccgcaccctacgatttggttctatatgttgcc
gaacacggcaaactgccggttgtaaattttgccgcaggcggaatcgcaacaccggctgat
gcagccctcatgatgcagctgggttgcgacggtatttttgttggctccggcatatttaaa
tcctctgaaccagccaagagagccagagcgatcgttctcgcaaccacccatcacaatgat
ccggacatactggccaaactttccgaagaaatcggtgaagcaatgcctggtctggagatt
tcctcgattgctccggcggaaagaatgcaggatcggggctggtga
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