Dehalobacter sp. CF: DCF50_p988
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Entry
DCF50_p988 CDS
T02279
Name
(GenBank) DNA polymerase III alpha subunit, DnaE
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
dec
Dehalobacter sp. CF
Pathway
dec03030
DNA replication
dec03430
Mismatch repair
dec03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dec00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DCF50_p988
03430 Mismatch repair
DCF50_p988
03440 Homologous recombination
DCF50_p988
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dec03032
]
DCF50_p988
03400 DNA repair and recombination proteins [BR:
dec03400
]
DCF50_p988
Enzymes [BR:
dec01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DCF50_p988
DNA replication proteins [BR:
dec03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DCF50_p988
DNA repair and recombination proteins [BR:
dec03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DCF50_p988
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
BscB_a-b
DUF7387
Motif
Other DBs
NCBI-ProteinID:
AFV04993
UniProt:
K4LEJ1
LinkDB
All DBs
Position
complement(1042362..1045775)
Genome browser
AA seq
1137 aa
AA seq
DB search
MFTHLHVHTEYSLLDGAARINDLVHSAAELEMPALAITDHGVMYGVLDFYKACGKQGIKP
IIGCEIYMAPGKRTERVLGKDDKNYHLVLLAETNEGYQNLVKIVSQANVDGFYYKPRADK
ELLQQHSKGLIALSACLGGEIPEYLMQDNPARARAAAMEYLDIFGPEHFYLELQDHGITD
QRKVNAGLWDLHRETRIPLLATNDVHYIRKEDASVQDILLCIQTGKTLADSSRMSFEGRE
YYLKSKQEMNLLFGETPEVLRQTNEIAERCNVSFSFGQHYLPVYEVPEGCTLDEYLRELC
WKAFPVFYPDATPEQRERLEYELGIITQTGFSGYFLIVSDFCRYAREHDVAVGPGRGSAA
ASMVAYLLGITSVEPLRHDLLFERFLNPERISMPDIDIDFDPEGREKVIKYVTEKYGEEK
VCQIITFGTMGAKGVLRDVGRVLNIPLSKVDKVAKAVPYELGMTLERALAVSPELQKMVR
EEEEIKKLYEISKSLEGMPRHASTHAAGVVIARDELTSYLPLQKTSDGLLMTQFPMKTVE
EIGLLKMDFLGLRNLTILTKALANIEQARDIRLDLNHLPLDDQATYQLLSDGNSTGVFQL
ESGGMRAILKDLKPSCFEDIIAVNALYRPGPMEQIPEFVRRKHGGLIKVLHSKIEEILRP
TYGIIVYQEQVMQIAQNLGGYSLGRADLLRRAMGKKDKKIMAEEKQNFIYGLQDSDGEWI
VPGALRLGIGEKDAEEIFDLMAKFAEYGFNKGHATAYAMISYQTAYLKANYPLEYTAALL
SSVIGASDKVTFYIQEARSSGIEILPPDVQYSYRDFTIEHGAIRFGLEAIRNVGTQVVDR
IIAERANGPFASFYDFIVRMDAKVLNKRTLESLIKAGAFQSLCSRAQAMKVLDQALELAQ
NRQKDSESGQMSLFDLDQDLDEGLSMPEIPEFSESEILKMEREYIGIYLTAHPLYSVNDL
FRKITSSEIAACLESAEEKKVILGGIINAYRQTITKKGEMMATFLLEDLTGTIEVLVFPR
LFPEVVRMDNDHIVVVHGRYYVNEDEKKIFAEKVLPIEEYSVKPDKLFLKIPSNQDTELT
DKILAVLGAFRGTHPVYFFCQDNKKTFEISPNYFVRPSEELDRALIALLGKDQVRWQ
NT seq
3414 nt
NT seq
+upstream
nt +downstream
nt
atgttcacacatcttcatgttcataccgaatacagccttctggacggcgcggccagaatc
aatgaccttgtgcattctgctgctgagctggaaatgccggcgctcgcgatcaccgatcac
ggcgtgatgtacggcgtgctggatttttataaagcctgcggcaaacagggaattaagcct
atcatcggctgtgagatctatatggctcccggaaaaagaacggaacgggtcctaggcaaa
gatgacaagaactatcatctggtccttcttgccgaaacgaacgagggctatcagaacctg
gtgaaaattgtctcgcaggccaatgtggacggcttttattacaaacccagggccgacaag
gaactgttgcagcagcacagtaaaggtttaattgcattgagcgcctgtctgggcggagag
atcccggagtacctgatgcaggacaatccagccagagccagagcggcggcgatggagtat
ctcgatatttttggtccggaacacttttatttggagctgcaggatcatggcatcaccgat
cagagaaaagtcaatgccggcctctgggacctgcaccgggagacacggattccgctgcta
gcgaccaacgatgtccattatattcggaaagaagatgcgtcggttcaggatatcctgctg
tgcatccagacaggaaagacgctggctgacagctccaggatgagctttgagggcagggag
tattatctgaaaagcaagcaggagatgaatttgctttttggggagacgcccgaggtttta
cgccagacgaatgagattgcggagcgctgcaacgtcagcttttcgtttggccagcattat
ctgccggtctacgaggttccggaaggctgcaccctggacgagtacctgcgggaattatgc
tggaaggcgttcccggtattctaccccgatgcaacgccggaacagcgtgagcggctggaa
tatgagcttgggattattacccagactggtttttccgggtattttctgattgtgtccgat
ttctgccggtatgcccgggagcatgatgttgcggtcggtccggggcgtggttcggcagct
gcgagtatggttgcgtacttgctcggcatcacctccgtggagccgctgcggcatgatctt
ctttttgaacgttttttaaatccggaaaggatatccatgccggatattgatatcgacttt
gacccggaaggccgggaaaaagttattaaatatgtaacagaaaagtatggggaagagaaa
gtttgccagatcattacgtttggtaccatgggcgccaagggcgtgctgagggatgtcgga
agagtcctgaatataccgctcagcaaagtcgataaagtcgccaaagcagtgccgtatgaa
ttgggcatgacgctagaaagagcgctggccgtttctcctgaactgcagaaaatggttagg
gaagaagaggaaatcaaaaagttgtatgagatttccaagtccctggagggaatgccgaga
catgcttccacgcatgctgccggcgtcgtgattgccagggacgaattgaccagttacctt
ccgcttcagaaaacctccgacgggctcttgatgacgcagtttccgatgaaaacggttgag
gagatcggactgctgaagatggatttcctgggcctgcggaacctgacgatcctgaccaaa
gcgcttgcgaatattgaacaggcccgcgatatccggcttgacctgaaccatttaccgctc
gacgaccaagcaacgtatcagctgctttccgatgggaacagtacaggtgtatttcagctg
gaaagcggtggcatgcgggccatcttaaaagatttgaagcccagttgttttgaagatatt
attgcggtaaacgcgctgtaccggcccggtccgatggaacagattccggagttcgtgcgc
cggaagcatggcgggctgatcaaagtcctgcattcaaaaatagaagagattttaagaccg
acctacgggattatcgtctaccaggaacaggtcatgcagattgctcagaatcttggcgga
tactctcttggacgagcagatcttctgcgcagggccatggggaaaaaagacaagaagatc
atggccgaagaaaagcagaactttatctacggcctgcaagacagcgacggtgaatggatt
gtgccgggagcgctccgtctgggtataggcgaaaaggatgctgaagagattttcgatctg
atggccaaatttgccgagtacggattcaacaaggggcatgccacggcttatgcgatgatc
tcatatcagacagcgtatctgaaggcgaattatccgctcgaatacactgcagcgctgctg
agttccgtaatcggcgcatcagataaagtcactttttacattcaggaagccaggagcagc
ggcatagagattctgccacccgatgtccagtacagttaccgggattttaccatagaacac
ggagcgatacgttttgggctcgaggcgatccgcaatgtcgggacacaggtggttgacagg
atcatcgccgaaagagcgaacggcccgtttgcgtcgttttatgattttattgtacgcatg
gatgctaaagttctaaacaaacgaaccctggaaagtctgattaaggccggcgcgtttcag
tcactgtgcagccgcgctcaagctatgaaagtcctggatcaggccctggagctggcccag
aaccggcaaaaggacagcgaatccggccagatgtctttgtttgatctcgatcaggacctc
gatgaagggttgagtatgcccgaaataccggaattcagcgagagcgagatcctgaagatg
gagagggagtatatcggtatttatctcacagcccatccactttattccgtgaatgacctg
ttcaggaaaatcacgagttcagaaatcgcggcctgtctcgaaagtgcggaagaaaaaaag
gtcattctgggtgggataataaatgcttatcggcaaacaataacgaaaaaaggggaaatg
atggctaccttcttactggaggatctgaccggaacgattgaggttttggtatttcccaga
ttgtttccggaagttgtcaggatggataacgaccatattgtggttgttcacggccgttat
tatgtgaatgaagatgagaagaaaatatttgctgaaaaagttctgccgatcgaggaatac
agcgtcaaaccggataaattgtttctgaagattccaagcaatcaggatacggagctgacc
gataagatcctggcggtccttggggcatttcgcggaacgcatcctgtctatttcttttgc
caggataataagaagacctttgagataagtccaaattattttgtcaggccatctgaagag
cttgacagggcgcttattgcgcttttgggaaaagatcaggtaagatggcaataa
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