Dechloromonas sp. TW-R-39-2: GBK02_00060
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Entry
GBK02_00060 CDS
T08942
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
dech
Dechloromonas sp. TW-R-39-2
Brite
KEGG Orthology (KO) [BR:
dech00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dech03021
]
GBK02_00060 (rpoH)
Transcription machinery [BR:
dech03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GBK02_00060 (rpoH)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_PafC
Motif
Other DBs
NCBI-ProteinID:
QRM17891
UniProt:
A0A974SST3
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Position
10488..11348
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AA seq
286 aa
AA seq
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MTQAMALPIPSAVGNIDAYIQAANRYPMLSESEETKLAERFHNDGDVEAARQLVLSHLRL
VVSIARGYLGYGLPHADLIQEGNIGLMKAVKRYDPTRGVRLVSFAMHWIKAEIHEYILKN
WRLVKVATTKAQRKLFFNLRSLKNNYEGVDTLSGTQAAEVAARLGVKQEEVVEMETRLTG
RDLALEGNPDDGDEAFAPIDYLADSRYEPTRVMENKAIARLHDEGLHNALSALDPRSRRI
VEARWLNNDEGATLHDLAAEFSVSAERIRQIEVKALQKMRGVLGAS
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgacccaagctatggcccttccaattccctctgcggtcggcaacatcgacgcctacatc
caggcagcgaaccgttatccgatgcttagcgagtccgaggagacaaagctggctgagcgt
ttccacaacgatggtgatgtggaagcggcacgtcagctcgtgctctcgcatttgcgcctt
gttgtttcaattgctcgcggctatctcggctacggcctgccgcacgccgacctgatccag
gaaggcaatatcggtctgatgaaggcggtcaagcgctacgacccgactcgcggcgtgcgt
ctggtgtcctttgccatgcactggatcaaggctgaaatccacgaatacatcctgaaaaac
tggcgcctggtcaaagtggccaccaccaaggcacagcgcaagctgttcttcaacctgcgt
agcctgaaaaacaactacgaaggtgtcgatacgctgtccggcacccaggccgccgaagtt
gctgctcgtttgggcgtcaagcaggaggaagtcgtcgagatggaaacccgcctgaccggc
cgcgacctcgcgctggaaggcaaccctgatgatggcgacgaggcttttgccccgatcgac
tacctggccgattcgcgctacgagccgactcgcgtcatggaaaacaaggccatcgcccgc
ctgcacgacgaaggactgcacaacgccctgtcggcactcgacccgcgcagccgccggatt
gttgaagcgcgctggctgaacaatgacgaaggcgcaacactgcatgacctggccgcagag
ttctcggtatccgccgagcgtatccgtcagatcgaggtcaaggcactgcaaaaaatgcgc
ggcgtactcggcgcgagctga
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