KEGG   Dechloromonas sp. TW-R-39-2: GBK02_03175
Entry
GBK02_03175       CDS       T08942                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
dech  Dechloromonas sp. TW-R-39-2
Pathway
dech00300  Lysine biosynthesis
dech00470  D-Amino acid metabolism
dech01100  Metabolic pathways
dech01110  Biosynthesis of secondary metabolites
dech01120  Microbial metabolism in diverse environments
dech01230  Biosynthesis of amino acids
Module
dech_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:dech00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    GBK02_03175 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    GBK02_03175 (dapF)
Enzymes [BR:dech01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     GBK02_03175 (dapF)
SSDB
Motif
Pfam: DAP_epimerase PhzC-PhzF
Other DBs
NCBI-ProteinID: QRM18467
LinkDB
Position
639309..640139
AA seq 276 aa
MKLKFSKMHGLGNDFVVLDGIRQHIDLSPAQLRFLADRNFGVGCDQILLVEKPGQPGVDF
RYRIFNADGSEVEQCGNGARCFVRFVHDVGLTDKREIRVETQKGLISPRLEENGDVTVDM
GIPRFLPNEIPFLHDDDVVIYSLDVADETLEISVVSMGNPHAVQVVESVDRAPVGDHGPL
IENHERFPQRVNAGFMQVLGEHAIKLRVYERGSGETLACGTGACAAVVAGIRRGLLVSPV
RVTTRGGDLSIAWGGPGQAVLMTGPAVTVFSGEIEL
NT seq 831 nt   +upstreamnt  +downstreamnt
gtgaaactcaaattctcgaagatgcatggtctgggcaacgatttcgttgtcctggacggc
attcgtcaacatatcgatctttccccggcgcaattgcgctttcttgccgatcgcaatttc
ggggtcggttgcgaccagattctgctggtcgaaaagccgggacagcccggcgtcgatttc
cgctatcgcatcttcaatgccgatggcagcgaagttgagcaatgtggcaacggggcccgt
tgtttcgtccgctttgtgcatgatgtcggcctgaccgacaagcgggaaatccgcgttgaa
acccagaaaggcctgatttcaccgcgccttgaagaaaatggcgatgtcacggtcgacatg
ggaattccccggtttttgccgaatgagattcccttcctccacgacgacgatgtcgtgatt
tattcgctcgacgtggccgacgaaacactggaaatcagcgtcgtttcgatgggtaatccg
cacgccgtgcaggtcgttgaaagtgtcgacagagcaccggtgggcgatcacggtccattg
atcgaaaaccatgagcgtttcccgcaacgggttaatgccggattcatgcaggtcctgggc
gaacatgctatcaagctgcgggtttatgagcgcggttcgggtgagacgctggcatgcggg
acgggcgcctgcgccgccgtggtggccggtatccgccgtggcttgctggtctcgccggtt
cgggtgacgacgcgtggcggcgatctgagcattgcctggggcggtcccggccaagctgtt
ttgatgaccggccctgcggtgacggtcttctctggagaaattgaattatga

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