Dechloromonas sp. TW-R-39-2: GBK02_03175
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Entry
GBK02_03175 CDS
T08942
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
dech
Dechloromonas sp. TW-R-39-2
Pathway
dech00300
Lysine biosynthesis
dech00470
D-Amino acid metabolism
dech01100
Metabolic pathways
dech01110
Biosynthesis of secondary metabolites
dech01120
Microbial metabolism in diverse environments
dech01230
Biosynthesis of amino acids
Module
dech_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
dech00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
GBK02_03175 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
GBK02_03175 (dapF)
Enzymes [BR:
dech01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
GBK02_03175 (dapF)
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GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
QRM18467
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Position
639309..640139
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AA seq
276 aa
AA seq
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MKLKFSKMHGLGNDFVVLDGIRQHIDLSPAQLRFLADRNFGVGCDQILLVEKPGQPGVDF
RYRIFNADGSEVEQCGNGARCFVRFVHDVGLTDKREIRVETQKGLISPRLEENGDVTVDM
GIPRFLPNEIPFLHDDDVVIYSLDVADETLEISVVSMGNPHAVQVVESVDRAPVGDHGPL
IENHERFPQRVNAGFMQVLGEHAIKLRVYERGSGETLACGTGACAAVVAGIRRGLLVSPV
RVTTRGGDLSIAWGGPGQAVLMTGPAVTVFSGEIEL
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
gtgaaactcaaattctcgaagatgcatggtctgggcaacgatttcgttgtcctggacggc
attcgtcaacatatcgatctttccccggcgcaattgcgctttcttgccgatcgcaatttc
ggggtcggttgcgaccagattctgctggtcgaaaagccgggacagcccggcgtcgatttc
cgctatcgcatcttcaatgccgatggcagcgaagttgagcaatgtggcaacggggcccgt
tgtttcgtccgctttgtgcatgatgtcggcctgaccgacaagcgggaaatccgcgttgaa
acccagaaaggcctgatttcaccgcgccttgaagaaaatggcgatgtcacggtcgacatg
ggaattccccggtttttgccgaatgagattcccttcctccacgacgacgatgtcgtgatt
tattcgctcgacgtggccgacgaaacactggaaatcagcgtcgtttcgatgggtaatccg
cacgccgtgcaggtcgttgaaagtgtcgacagagcaccggtgggcgatcacggtccattg
atcgaaaaccatgagcgtttcccgcaacgggttaatgccggattcatgcaggtcctgggc
gaacatgctatcaagctgcgggtttatgagcgcggttcgggtgagacgctggcatgcggg
acgggcgcctgcgccgccgtggtggccggtatccgccgtggcttgctggtctcgccggtt
cgggtgacgacgcgtggcggcgatctgagcattgcctggggcggtcccggccaagctgtt
ttgatgaccggccctgcggtgacggtcttctctggagaaattgaattatga
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