Dechloromonas sp. TW-R-39-2: GBK02_07935
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Entry
GBK02_07935 CDS
T08942
Name
(GenBank) GAF domain-containing protein
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
dech
Dechloromonas sp. TW-R-39-2
Brite
KEGG Orthology (KO) [BR:
dech00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dech03000
]
GBK02_07935
Transcription factors [BR:
dech03000
]
Prokaryotic type
Helix-turn-helix
Other families
GBK02_07935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
HTH_8
GAF
HTH_30
Mg_chelatase
HTH_7
HTH_23
AAA_5
PAS
HTH_28
AAA_2
HTH_29
HTH_20
HTH_1
HTH_22
HTH_Tnp_ISL3
HTH_Tnp_1
AAA_3
ATPase
NUMOD1
Phage_CP76
EhaF
Motif
Other DBs
NCBI-ProteinID:
QRM19329
LinkDB
All DBs
Position
complement(1669087..1671072)
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AA seq
661 aa
AA seq
DB search
MGQVQLPAETHDLRLRQARQLFFEQGSVPDGLVTQQIVRSWERCRRFGLTENNALPIVEA
LDRMALKTEQDRNRYLLQQGRPIMEHVFEHIRESGSMVILADANGLLLETVGDAEFLDRA
DRVALAAGASWDENQRGTNAIGTTLLEETPIEVLGGEHFLESNGFLTCCASPIFGPDGRL
IGVLDISGDYRAPQRHTLGLVRLSSLIVEKRLFESIHARDIIVCFHERADYLGSPKEGLA
AVSPDGQVLAINRNGTDILGIRQVDAVRRDFSMVFESNLSALVDRLRNHPQASCEIKVNG
RALHLQLRGQLPPQTVAGRVYDEAPAIRPPRRAETVAPPKLTLDTLNTGDTRLQAAIDRS
RRILGRDIPILIQGESGAGKEMFAKAFHNSGPRQSEPFVALNCASIPETLIESELFGYQG
GAFTGARKEGAPGKIQQAHGGTLFLDEIGDMPLNLQARLLRVLQERCVTPLGSTRSIQVD
ISLVCATHRKLREEVARGTFREDLYYRLNGMCVTLPALRERTDIRQMVSKIAAAECSGRA
PVKFSEDALRAIEQYTWPGNIRQLFNVIRVGIALLDDDEILITPSHLPEELFEQEYSKPS
PAASVSQPSPTAPVEQGAGSLEEIGRLAAQRTLEAAGGNISAAARQLGISRNTLYRKLGR
L
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgggacaagtacaacttccggccgagacgcatgatttgcgactgcgtcaggccaggcag
ctatttttcgaacagggcagcgtgcccgacgggctggtcacgcaacaaatcgtccgttcg
tgggaacgttgccgacgcttcggcctgaccgaaaacaatgccctgccgattgtcgaagca
ctcgaccggatggccctgaaaaccgaacaggatcgcaaccgctacctgttgcaacagggt
cggccgatcatggagcatgttttcgagcacatccgtgaatccggcagcatggtcatcctg
gccgacgccaacgggctgctcctggaaaccgtcggcgatgccgagtttctcgaccgggcc
gaccgtgtggcgctggccgctggtgcgtcgtgggatgaaaaccagcgcggcaccaacgcc
atcggcacgacattgctcgaagaaacgccgattgaagtactgggcggcgaacacttcctt
gaaagcaatggtttcctgacctgctgcgccagcccgatcttcgggccggacggccggctg
atcggcgtcctcgacatttccggcgattaccgcgccccacagcgccatacgctgggcctg
gtccggctgtcttcgctgattgtcgaaaaacgcctgttcgaatcgatccacgcccgcgac
atcatcgtctgcttccacgaacgggccgattacctcggcagcccgaaagaaggcctggcc
gccgtttcaccggatggccaggtgctggcgatcaaccgcaacggcaccgatatcctcggc
atccgccaggtcgacgccgtgcgccgcgatttctcaatggttttcgagagcaacctgtcg
gcactggtcgaccgcttgcgcaaccacccgcaggccagttgcgaaatcaaggtcaatggc
cgcgctctgcacctccaattgcgcggccagttgccgccacagacggtggccggccgggtc
tacgacgaagcgccggcgatacgccctccccggcgcgccgagaccgttgctccgccgaag
ctcacgctcgacaccctgaacaccggcgatacccgcctgcaggctgcaatcgatcgttcg
cggcgcatcctcggccgcgacattccgattctgattcaaggcgaatcgggtgccggcaag
gaaatgttcgccaaggcctttcacaacagcggtccgcgccagagcgagccgtttgtcgca
ctcaactgcgcctcgattccggaaaccctgatcgaatcggaactcttcggttaccagggc
ggcgctttcaccggcgcccgcaaggaaggcgcaccgggcaagatccagcaggcccacggc
ggcaccctcttcctcgacgaaatcggcgacatgccgctcaatctgcaagcccggctgctg
cgcgtgctgcaggaacgctgtgtcacgccgcttggcagcacgcgctcgatccaggtcgac
atctcgctggtctgcgccacgcaccgcaagctgcgcgaagaagtcgcccgcggcactttc
cgcgaagacctgtactaccggctgaacggcatgtgcgtcacgctgccggccctgcgcgaa
cgaaccgacattcgccagatggtcagcaagattgccgctgccgaatgtagcggccgggcg
ccggtcaagttctccgaagacgccctgcgggctatcgagcaatacacctggccgggcaac
atccgccagttgttcaacgttatccgggtcggcattgccttgctcgacgacgacgaaatc
ctgatcacccccagccatttgccggaggaattgttcgagcaggaatacagcaagccaagc
ccggcagcttcagtcagccaacccagtccgaccgccccggtcgagcaaggcgcaggcagt
cttgaagaaatcggccgcctcgctgcgcaacgtaccctcgaagcagccggcggcaacatc
tccgcggcggcccggcaactggggatcagccgcaacaccctgtatcgcaagctcggccgg
ctttaa
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