KEGG   Dechloromonas sp. TW-R-39-2: GBK02_08680
Entry
GBK02_08680       CDS       T08942                                 
Name
(GenBank) DNA-binding protein HU
  KO
K03530  DNA-binding protein HU-beta
Organism
dech  Dechloromonas sp. TW-R-39-2
Brite
KEGG Orthology (KO) [BR:dech00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:dech03032]
    GBK02_08680
   03036 Chromosome and associated proteins [BR:dech03036]
    GBK02_08680
   03400 DNA repair and recombination proteins [BR:dech03400]
    GBK02_08680
DNA replication proteins [BR:dech03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    GBK02_08680
Chromosome and associated proteins [BR:dech03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    GBK02_08680
DNA repair and recombination proteins [BR:dech03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      GBK02_08680
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 FIMAH
Other DBs
NCBI-ProteinID: QRM19468
UniProt: A0A974SVZ5
LinkDB
Position
complement(1844199..1844471)
AA seq 90 aa
MNKTELIDQIAASADISKAAAGRALDATVEAVKAALKAGDTVSLIGFGTFYVGERAARTG
RNPRTGKTLEIKAAKSPKFRAGKGLKDAIN
NT seq 273 nt   +upstreamnt  +downstreamnt
atgaacaagactgaactgatcgatcaaatcgctgcatccgctgacatttccaaggctgct
gccggccgcgcgctcgacgctaccgtcgaagccgtcaaggctgccctgaaggccggcgac
accgtcagcctgattggcttcggtacgttctacgtcggcgaacgcgccgcccgcaccggt
cgcaacccgcgcaccggcaagacccttgaaatcaaggccgccaagtcgccgaaattccgc
gctggcaagggtctgaaagacgccatcaactaa

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