Dechloromonas sp. TW-R-39-2: GBK02_10615
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Entry
GBK02_10615 CDS
T08942
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
dech
Dechloromonas sp. TW-R-39-2
Pathway
dech03030
DNA replication
dech03430
Mismatch repair
dech03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dech00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GBK02_10615 (holB)
03430 Mismatch repair
GBK02_10615 (holB)
03440 Homologous recombination
GBK02_10615 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dech03032
]
GBK02_10615 (holB)
03400 DNA repair and recombination proteins [BR:
dech03400
]
GBK02_10615 (holB)
Enzymes [BR:
dech01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GBK02_10615 (holB)
DNA replication proteins [BR:
dech03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GBK02_10615 (holB)
DNA repair and recombination proteins [BR:
dech03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GBK02_10615 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA_16
Zeta_toxin
AAA_5
Motif
Other DBs
NCBI-ProteinID:
QRM19820
UniProt:
A0A974SWD9
LinkDB
All DBs
Position
2203530..2204549
Genome browser
AA seq
339 aa
AA seq
DB search
MNILKLHEQVWSDLQGRRQKLPHALLLVGQKGIGKFELAKLFAASLLCEQPQHTGIPCGA
CLACNWYSQGNHPDFRLLQPEALSADLEAEEGKKKPSQQITIDQVRGLDDFLIVGTHRAG
LRIVVVNPTEAMNRNTANALLKTLEEPAPNTLFLLVSSEPLRLLPTIRSRCQTMPVALPS
SKVAAQVLADDGIPDAARWLALAGGSPSLAIELATSGQGAWLELLVKRLSAGRHADPLAM
AAELEKAVKDSKGKLLLKTVVEALQKWLIDLNLAKNGMPTRYFLPQQATMTGLADMIPAV
RLLHCYRHMISRRQEAEQPLNARLFLEGIFLDYRALFAN
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgaacatattaaaacttcacgaacaagtctggagcgatcttcagggcaggcgtcaaaag
cttccccatgcactactccttgtcggtcaaaaagggatcggcaaatttgaactcgccaag
ctgtttgctgccagcctgctttgcgaacaaccgcagcacacaggtattccgtgtggcgcc
tgtctcgcgtgcaactggtacagccaaggcaaccatcctgattttcgcctgctgcaaccc
gaagcgctctcggcggacctggaagcggaagagggtaaaaagaaacccagccagcagatc
accatcgaccaggttcggggccttgatgacttcctgattgtcggcacccatcgggccgga
ttgcgtattgtcgtggtcaacccgacagaagcaatgaatcgaaacaccgcaaacgcactt
ctcaaaacactcgaagaacctgcgccaaatacattgtttttattggtttcaagcgaaccg
cttcgcttgttaccaaccatcaggagccgatgccagacaatgccggtcgcccttccatca
agcaaggttgcggcacaagtactggccgacgatggcattcccgatgcagcgcgctggctg
gccctggcaggaggttcgcccagcctggcaattgaactggcaacatcagggcaaggggca
tggttggaactgctggtcaaacgactgtccgcaggtcgccatgctgatccgttggccatg
gcggccgaactggaaaaagcagtcaaggacagcaagggcaagctgctactcaaaaccgta
gttgaagcactgcaaaagtggctgatcgatttgaacctggccaaaaacggcatgccgact
cgatattttctacctcagcaggccacaatgaccggcttggctgatatgattcctgctgtg
cgtttattacattgttaccgccacatgatttcacgccgccaggaagccgagcagccgctg
aacgcgcgtctttttctggaaggtatctttcttgactatcgagccctgtttgccaattga
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