Dechloromonas sp. TW-R-39-2: GBK02_12605
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Entry
GBK02_12605 CDS
T08942
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
dech
Dechloromonas sp. TW-R-39-2
Brite
KEGG Orthology (KO) [BR:
dech00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dech03032
]
GBK02_12605 (gyrA)
03400 DNA repair and recombination proteins [BR:
dech03400
]
GBK02_12605 (gyrA)
Enzymes [BR:
dech01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
GBK02_12605 (gyrA)
DNA replication proteins [BR:
dech03032
]
Prokaryotic type
DNA Topoisomerases
GBK02_12605 (gyrA)
DNA repair and recombination proteins [BR:
dech03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
GBK02_12605 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
QRM20172
LinkDB
All DBs
Position
complement(2613554..2616190)
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AA seq
878 aa
AA seq
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MDQFAKETLPISLEDEMRRSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMHELNNDWN
KAYKKSARIVGDVIGKYHPHGDYAVYETIVRMAQDFSLRYMLVDGQGNFGSVDGDSAAAM
RYTEVRMAKIGHQLLEDLDKETVDFGPNYDGSEHEPLVMPARIPNLLINGSSGIAVGMAT
NIPPHNLNEVIAGCLALLENPAITIDDLIEYIPAPDFPTAALIYGVMGVREGYKTGRGRV
VMRARTHFEDMEKGNGRQALIVDEIPYQVNKKSLIEKIAELVNEKKIEGISDIRDESDKS
GMRIVIELKRGEVGEVILNNLYKQTQLQDTFGMNMVALVDGQPRLLNLKQMLECFLSHRR
EVVTRRTVYELRKARERGHILEGLAVALSNVDDIITLIKAAPTPADAKRGLMERQWRSPV
VEEMLVRAASDASRPDGLAPEFGLSSQGYRLSDAQAQAILELRLQRLTGLEQDKIVSEYK
DVMAKILDLLDILAKPARITEIIVSELTAIREQFGDERRSEIVLHTQELGIEDFITPMDM
VVTLSHGGYVKAQPLADYRSQRRGGRGKQAAAIKDEDFVDHLFVANTHDYILCFSNRGRC
YWLKVYEAPQGSRTSRGKPIVNLFPLEEGERINAVLPVKEFSDDQYVFMATVMGTVKKTP
LSDFSNPRKAGIIAVALDEGDILVGVELTSGQSDIVLVSDAGKAVWFDEEDVRPMGRGAR
GVRGMRLMEGQSVISLLVAESDQATVLVATENGYGKRTVLADFRHSGRGTQGVRAIADSE
RNGTVVGAKLVSDEDEIMLITTGGVLIRTRVAEIRGMGRATQGVTLISLDEGEKLAGLEK
VAESVVEVEAEAEGDAAEAVVEAAPETPAPNVEEGGEA
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atggaccaattcgccaaagaaactctgccgatcagcctcgaagacgagatgcggcgttcc
tatctcgattacgcgatgagcgtgattgtcggtcgtgccctgccggatgcgcgtgacggc
ctgaagccggtacatcgccgcgtcttgttcgcgatgcacgagttgaacaacgactggaat
aaggcgtacaagaaatcagcccgtatcgtcggtgacgtgatcggtaaatatcacccgcat
ggtgactacgccgtttatgaaaccatcgttcgcatggcgcaggatttttcgctgcgctac
atgttggtcgatggccagggcaacttcggctcggtggacggcgacagcgcggcagcgatg
cgttacaccgaagtgcgcatggccaagatcggccaccagttgctggaagatctcgacaag
gaaaccgtcgatttcgggccaaactacgatggttccgagcatgagccgctggtcatgccg
gcacgcattcccaatctgctgatcaacggttcttccggtattgctgtgggtatggcgacg
aacattccgccccacaatctgaacgaagtgatcgccggttgtctggccttgctggaaaac
ccggcaatcaccattgacgatctgatcgaatacattccggcccccgattttccgacggct
gcgctgatttacggtgtgatgggtgtgcgcgaaggttacaagaccggtcgtggtcgtgtg
gtcatgcgcgcccgtactcacttcgaggacatggaaaagggcaatgggcgtcaggcactg
atcgtcgatgaaattccctaccaggttaacaagaagtcgctgatcgagaaaatcgctgaa
ctggtcaacgagaagaaaatcgagggcatctcggacatccgcgacgagtccgacaagtcc
ggtatgcgcatcgtcatcgaactgaagcgtggcgaagtcggcgaggtcatcctcaataac
ctctacaagcagacccaactgcaagacaccttcggcatgaacatggtggcgttggtcgat
ggccagccgcgcctgctcaacctcaagcagatgcttgagtgcttcctgtcgcatcgtcgc
gaagtggtgacgcgccgtactgtctatgaactgcgcaaggcgcgcgagcgtggccatatc
ctggaaggtctggccgtcgcgttgtccaatgttgatgacatcatcacgctgatcaaggcg
gcaccgacgccggccgatgccaagcgcgggctgatggaacgccagtggcgcagtccggtg
gttgaggaaatgctggttcgtgccgcctcggatgcttcgcgtccggatggtctggcgccg
gaattcggtttgtcgtcgcagggctatcgtttgtccgatgctcaggcccaggcaattctg
gaactgcgtctgcagcgcctgaccggtctggagcaggacaagatcgtcagcgagtacaag
gacgtcatggccaaaatcctcgatctgctcgatatcctggccaagcctgcacgcatcacc
gaaatcattgttagcgaactgaccgcgatccgtgaacagttcggcgacgagcgtcgttcg
gaaatcgtactgcacacgcaggagctggggattgaagatttcatcacgccgatggacatg
gtcgtcacgttgtcgcatggcggttacgtcaaggctcagccgctggccgattatcgttcg
cagcgtcgtggcgggcgtggcaagcaggcagcggcgatcaaggacgaggatttcgtcgat
cacctgttcgtcgccaatacgcacgattacatcctgtgcttctcgaatcgcggccgttgc
tactggctgaaggtttacgaagcgccacagggtagccggaccagtcgcggcaagccgatc
gtcaatctcttcccgttggaagagggcgagcggatcaatgccgtgctgccggtcaaggaa
ttctccgatgaccagtacgtcttcatggcgacggtcatgggaacggtcaagaagaccccg
ttgtccgacttctccaacccgcgcaaggccggcatcatcgccgttgcgctggacgaaggc
gatatcctggtcggcgtcgagctgacttccggccagagcgatatcgtgttggtttcggat
gccggcaaggcagtctggttcgacgaggaagatgtccgtccgatgggccgtggggctcgt
ggcgtgcgcggtatgcgtctgatggaaggtcagtcggtcatttctctgctggtcgccgag
agcgatcaggcgaccgtgcttgttgcaaccgagaatggctacggtaaacgtactgttctg
gctgatttccgtcactccggtcgcggtacgcagggcgttcgcgccattgccgacagcgaa
cgcaacggaacggtagtcggtgccaagctggtcagcgatgaagatgaaatcatgctgatc
acgaccggtggcgtgctgatccggacccgcgttgcggaaatccgcggcatgggccgggcg
acacagggcgtcacgctgatttcgctggatgaaggcgagaagctggctggtcttgaaaaa
gtggccgaatccgtcgttgaagtcgaagcggaagccgagggcgatgcggcagaggcggtt
gtcgaggcagcccctgaaaccccggcgccgaatgttgaagaaggtggagaagcctga
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