Dechloromonas sp. TW-R-39-2: GBK02_12635
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Entry
GBK02_12635 CDS
T08942
Name
(GenBank) peptide ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
dech
Dechloromonas sp. TW-R-39-2
Pathway
dech02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
dech00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
GBK02_12635
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dech02000
]
GBK02_12635
Transporters [BR:
dech02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
GBK02_12635
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
QRM20178
UniProt:
A0A974SX92
LinkDB
All DBs
Position
complement(2620916..2623060)
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AA seq
714 aa
AA seq
DB search
MRTNFVCLSFFLLLAGCGQSWNDPYPAADAGQNILYTVFTERPKHLDPAQSYTEDELAFT
GQIYEPPLQYHYLKRPYELMPATVEAVPQPRFFDAAGRELPADVAPERVAESVYELKLKP
GIRFQPHPAFALDAHGQPLYLGKNAADGRQSMSDFAEMATRELTADDYIYQIKRLAHPRL
HSPIFGMMADKIVGLQALGESLGQAAKALPKDAWLDLDEHALSGVQKVDALTWRIRIKGK
YPQFLYWLAMPFFAPVPREVDRFFSQPGMAAKNFSLDWWPVGTGPYFLAENDPNRRMVLV
RNPNFHGQTYPCEGEASDRATGLLDDCGKSLPFVDRAIFTREKEAIPYWNKFLQGYYDAS
GISSDSFDQAVRVNVGGEVGLTDEMQAKGIRLLTSVKSSTFYMGFNMLDPVVGGLVPRST
RLRQAISIAIDQEEYISIFANGRGIAAQGPLPPGIFGYENGEAGIDRVVYDWVDGKPKRK
PVEQARQLMVEAGYPNGRDEKTGEPLVVNLDTTGGGSGEKSRLDWLVRQFAKIDIQLVVR
STDFNRFQDKIRKGNVQLYYLGWNADYPDPENFFFLLDGNEGKVGRGGENASNYANPAFD
RLFARMKNMDNTPERLAIVREMNGLLHHDAPWVFGFHPKSYTLSHRWLKNRKPSEVGNNI
LKYQRIDTVDRSNARKLWNPPVFWPIGLAVLVLVLALLPAWSAYRRREQRAALK
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgcgaacaaattttgtctgcctctctttcttcctgttgctggccggttgtggccaatcc
tggaatgatccctatccggccgctgatgccgggcagaatattctttacaccgtattcacc
gaacgcccaaagcatcttgatccggcccagtcctacaccgaggatgaactggcattcacc
gggcagatttatgaaccgcccttgcagtatcactatctcaagcgtccctacgaattgatg
ccggccaccgtcgaggccgtgccgcaacctcggtttttcgatgccgcgggtcgtgagttg
ccggctgacgtggcgccggagagggttgccgagagtgtgtatgaattgaaattgaagccg
ggcatccgctttcagccgcatccggcttttgcgctcgatgctcacggtcaaccgctttac
ttgggcaaaaatgcggccgatggtcgtcagtcgatgagcgactttgcagaaatggcgacg
cgtgaactgaccgccgatgactacatctaccagatcaagcgactggctcatccgcgtctg
cattcaccgattttcggcatgatggccgacaaaatcgttggcttgcaagccttgggggaa
tcgcttgggcaggcggccaaagccttgccgaaagatgcctggctggatctcgatgagcat
gccttgtcgggcgttcagaaagtcgatgcgctgacctggcgcatccgtatcaagggcaag
tatccgcagtttctttattggctggcaatgccgttctttgcgccggtaccgcgtgaggtc
gaccgctttttcagccagccgggcatggcggcaaagaacttctcgctggactggtggccg
gttgggacggggccgtattttctcgccgaaaatgatccgaatcgtcgcatggtacttgtc
cggaatccgaatttccacggccagacttatccctgcgaaggtgaggcgagcgatcgcgca
acgggcttgctggatgattgcggcaaatcgctgccgtttgtcgatcgggccatctttacc
cgtgagaaggaggccattccgtactggaacaagttcctgcaggggtattacgatgcttcc
gggatttcctcggatagcttcgatcaggcggttcgcgtcaatgtcggcggcgaggtgggg
ctgactgacgaaatgcaggccaagggtatccggctgctgacttcggtcaagagttcgacc
ttctacatgggcttcaatatgctcgatccggttgtcggcgggctggtgccgcggtcaacc
cgtttgcggcaggcaatttcaattgccatcgatcaggaagagtacatttcgatttttgcc
aatggccggggtattgccgcgcaggggcctttgccgccggggatttttggttacgagaat
ggcgaagcgggaatcgatcgtgtggtctatgactgggtcgatggcaagcccaagcgcaag
ccggtcgagcaggcgcgccagttgatggtcgaggcgggctatccgaacgggcgcgatgaa
aaaacaggcgagccgctggtcgtcaatcttgatacgaccggtggaggaagcggtgaaaaa
tcccggctggactggctggtccgtcagtttgccaagatcgacatccagctggttgtccgt
tcgacggacttcaatcgtttccaggacaagattcgcaagggtaatgtccaactctattat
cttgggtggaatgccgattatcccgatccggagaatttctttttcctgctcgatggtaat
gaaggcaaggttggccggggtggagagaacgcttcgaattacgccaatccggcgtttgat
cgcttgttcgcccgcatgaaaaacatggacaacacaccggagcgtctggcgatcgtccgc
gaaatgaacgggcttttgcatcatgatgccccctgggtcttcggctttcatcccaagagc
tataccttgagccatcgctggttgaaaaatcgaaaaccgagcgaagtcgggaacaatatt
ctgaaatatcagcgaattgacacggtcgaccgcagcaatgcccgaaaattgtggaatccg
ccggttttctggccaatcgggctggctgtgctggtcctggtgctggccttgttgccggcc
tggagcgcttaccgccgacgtgagcaacgagctgcgctgaaatga
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