Dechloromonas sp. TW-R-39-2: GBK02_15495
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Entry
GBK02_15495 CDS
T08942
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
dech
Dechloromonas sp. TW-R-39-2
Pathway
dech00470
D-Amino acid metabolism
dech00550
Peptidoglycan biosynthesis
dech01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dech00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
GBK02_15495 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
GBK02_15495 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
dech01011
]
GBK02_15495 (murD)
Enzymes [BR:
dech01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
GBK02_15495 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
dech01011
]
Precursor biosynthesis
Amino acid ligase
GBK02_15495 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
MurD-like_N
Mur_ligase_C
2-Hacid_dh_C
AdoHcyase_NAD
NAD_binding_7
NAD_binding_2
Shikimate_DH
KARI_N
Pyr_redox_3
FMO-like
Motif
Other DBs
NCBI-ProteinID:
QRM20684
LinkDB
All DBs
Position
complement(3208466..3209818)
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AA seq
450 aa
AA seq
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MELRGKRVLVIGLGESGLAMAKWLHRQGAVVRVADTRDTPPNVEALQAVAPGAELFAGPL
GDATFAGMEIVALSPGVPKATPAIAAVDLPLISEIELFAAGVREQVAGSQIIAITGSNGK
TTTTALTAHLLNGAGVPAIACGNISPSALDALMDAQDAGTLPQVWVVELSSFQLETTHHL
NAAAATVLNVSEDHLDRYAGSMAEYAAAKSRVFQGKGIMVLNRNDDWSMANGRCGRKMVT
FGLDAAPRALDFGLADGVITLGKTALVAVDALKLAGLHNAANAMAALALCQAVGVEIDRL
LAPLQSFTGLPHRVETVAEIGGVIYVDDSKGTNVGATLAAIEGMGRKVAIVLGGDGKGQD
FSPLKPALEKHGRAVALIGRDAAAIGMALEGSGVPTRILGDMEAAVRWLSAHAEAGDCVL
LSPACASLDMYRNYAHRAEAFIAAVKGLSA
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atggaacttcggggcaaacgcgtactggtgatcgggctcggcgagtccggactggcgatg
gccaaatggctgcatcgccagggcgctgtcgtgcgcgtcgccgatacccgtgacaccccg
ccgaacgtcgaggcgctgcaggccgttgcgcccggcgctgaactgttcgccggcccgctc
ggtgatgcaacgtttgccgggatggagattgtcgcgttgtcgccgggtgtgccgaaagcg
acgccggcgattgccgcggtcgacctgccgctgatctccgaaatcgaactctttgccgcc
ggcgtccgcgaacaggtggccggttcgcaaatcattgccatcaccggtagcaacggcaag
acgacgacgacggccttgaccgcccatttgctcaacggcgcaggtgtcccggcgattgcc
tgcggcaacatttcaccgtcggcgctcgatgcgctgatggatgcgcaggatgccggcacc
ttgccgcaggtctgggtggtcgagttgtcgagcttccagctggaaacgacgcatcatctg
aacgcggcggcagcgacggtcctcaatgtctcggaagatcacctggatcgttacgctggc
agcatggccgaatacgccgcagccaaatcccgtgtcttccagggtaagggcatcatggtg
ctgaatcgcaatgacgactggtcgatggccaacgggcgttgtgggcgcaagatggttact
tttggtctggatgccgcgccacgcgcattggatttcggcctggccgacggggtgatcacc
ctgggtaaaaccgcgcttgtcgcggtcgacgcactgaaactggccggattgcacaacgcc
gccaatgccatggccgcgctggcgttgtgccaggcggtgggcgtcgagatcgatcgtctg
cttgctccgctccagtcctttaccggtttgccgcaccgggttgaaaccgtggctgaaatc
ggtggtgtgatttacgtcgatgactccaaaggcaccaatgtcggcgcaacgctggccgcc
atcgaaggcatgggccgcaaagtggctatcgtgcttggcggcgatggcaaggggcaggat
ttttcaccgctcaagccggcactggaaaagcatggccgcgccgtggccctgatcggccgc
gatgccgccgcgatcggcatggcgcttgaaggcagcggtgtgccgacccgcattctgggc
gacatggaagccgccgttcgctggttgtcggcccacgccgaagccggtgattgcgtgctg
ctttcgccggcctgcgccagtctcgacatgtatcgcaactatgcgcaccgggcagaagcc
ttcatcgctgccgtgaaggggttgtcagcatga
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